SimpleSearch - Line and FST details


Line specific information

 
Line ID 356B08
Vector Used pAC161
Line Availability available as T3 set from NASC (N434100)
Segregation Analysis 50:42:36
Confirmed for Hit At5g63490
Parent of DUPLO pair none
Parent of pair(s) 2202, 80803, 80806, 80808

Gene hit At5g63490

 
Sequence (A. th genome BLAST matches underlined) 
>58-K016833-022-356-B08-8409
AAGAACCATTTCCTCCTGCTTTAAACTTTTGGTTGATAAGCACCCAGAACCAGAGTCGAA
GATGCATCCTTCATGCCATTGCCCATAAACCCCTTTTGCTTTCTGAATTGATTTCATCAT
TATAAGTTGCAAAGTCTGAGATCACATTTGCATGATTCAAGAGAAGGCAAAGGATCAATA
TCGAGAAGAGCGTCAGGATCAGCAGAATCACTGCAGTATCCACAGACAGACGCTGGGGCT
GCCTCCCAATCACTGAGATCAGTCGCATCCAAGACAATTGCCTGACCTTCCTTTCATGGA
TCGTATCGGCAGAATCCAGCTTCGATTCCTCCGATATTCGATATCAAGTGAGTCATTGGC
AGATCACCTGTGCTGAGGAGTCTCACGGGCACTCCGGTTTTCTGACACGGCTGATATGTC
CTTATTGCCACAGACACTGATGATATGGTATCTTGGGTGCATGCAAGACGAGCCTCGCGT
CTCTGACTCGACCAAGAGGATCAACGCGCTATTCAGGCGTATAAGACGCGACATGATCTA
TCTCACCTGTTTTACACTATGTACTCGCAGGACCTCTAGGTCCTCTATGTGATCTGGNNC
ATTCGTGGAACCTCCGGAGCTCCCCCNNAATCCTCAAAAATGGAAAAGTTCTTCTTTGCA
ATCTCCTGCATGAACAAAAACTTCCGTTTATTAATGCCCACAGAGAAGAAACCTTATTAT
CCCTTTCCCATAAGGTTATTAACCTAGAAATCAAATGACCCCGATGGCTTGAATGTATTC
AAAAAATTATCAACATTTCCATGGGTCTA
GenBank Accession BX001450 [GenBank]
Graphic View Graphic view of gene At5g63490
Predicted Position of Insertion Chr5:25419039 - go to primer design
BLAST e Value 1e-74
Hit Clone Code (BAC ID) MLE2
Hit Gene Code At5g63490 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37