SimpleSearch - Line and FST details
Line specific information
| Line ID | 356D03 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N434119) |
| Segregation Analysis | 50:47:47 |
| Confirmed for Hit | At3g20110 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 7866, 10704, 10709, 11065, 11067, 80998, 81060, 81074, 81090, 81091, 81092, 81093, 81094, 81095, 81096, 81098, 81099, 81100, 81102, 81103 |
Gene hit At3g20110
| Sequence (A. th genome BLAST matches underlined) | >20-K016871-022-356-D03-8409 TGATCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATATCCTGGATATTACTCCA CTCTTTCCTCGGGAAGTGATCAAACCATGAGATTCCCCAATGAGCCAACATTCATAGTGG TGACTGGATAGAGTGTGTACAATCCGTCAAAAAATTGTGCCAGCATTACTTAGGCACTGC ACTCATCGGGGCCAGAATGCAATAGCGAGTACAACTCTCGAGTAACATTCCCCTCTGCAT AGCTTTCTCAGGAGTGCTGTACGAAGAGACGACTTGGCCGCACTCTCTTTGGTGCCATGT TCTAACTTTGACATGCCTTTTCCAGCTTCACCACACACACGGTAAGTGACCGCTCTTCCA CTATGGGATCCTGCCTATCACGAGAAAGGACGTTCCAAAGAAGTTGTGAGATGAAAGGGT TCTACATAGCGGAAAAGACAACACTTGTAGTTAATGCTTATGCTGTGATGAGAGATCCTA CTACTTGGGAAGATCCTGATGAGTTTAAGCCAGAGAGGTTTCTAAGGCAAGAGGAGGAGA GAAGAGCACTGAAGCACATTGCTTTTGGAAGTGGAAGGAGAGGCTGTCCAGGATCAAACC TATGGG |
| GenBank Accession | BX001473 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:7022384 - go to primer design |
| BLAST e Value | 2e-119 |
| Hit Clone Code (BAC ID) | MAL21 |
| Hit Gene Code | At3g20110 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | cytochrome P450, family 705, subfamily A, polypeptide 20 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g37380
| Sequence (A. th genome BLAST matches underlined) | >20-K016833-022-356-D03-8409 TGATCTGTAGATTTCCGGACATGAAGCCATTTACATTGAATATACTCCCGGATAGCATGT GCACTCTATGAGATTGGTACACTTTAGACACGAGCTGATTTCCAAAAATTTTAAAAGACT CAGTGTTGTAGCAACGATGGCTTGGTTTCATGGCTCTTAAGTTCTGTTTCAGTGCTCTTA ATGTTTGATTCACTTTCTCCAATAATGAGTAGCTTTGAGGAATCAGGCGTATTCATTCAT GTCTATGGGATCCTCCCCTATAGTGAGACAAGAGAACTCCCCCTTACTCTATTTGGTGCC GTGATCCTACTTCCAGATACTCTCTCACTTATTACCAGTGAAGATGAAACAGGTATCTCT ACAGCGATGGGTGCATCCAATGTGAGGGAATGTGTCTGATGGGCGGATTTGCTATGGAAT CCTCCTTACAGAGAGCGATACGAGATCGCCGTTTCTA |
| GenBank Accession | BX001472 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:14816903 - go to primer design |
| BLAST e Value | 6e-80 |
| Hit Clone Code (BAC ID) | MNJ8 |
| Hit Gene Code | At5g37380 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Chaperone DnaJ-domain superfamily protein |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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