SimpleSearch - Line and FST details
Line specific information
| Line ID | 356E04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N434132) |
| Segregation Analysis | 50:50:40 |
| Confirmed for Hit | At3g56080 |
| Parent of DUPLO pair | 12090 |
| Parent of pair(s) | none |
Gene hit At3g56080
| Sequence (A. th genome BLAST matches underlined) | >29-K016833-022-356-E04-8409 TGATCTGAAATTTCCCGGACATGAAGCCTTTACACGGCCGCCCAATCGCGGGCACTGCCC TGGGGATCGGAATCGACTAACAGAACATCGGCCCCGGCGAGTTGCAGGGCGCGGGCTATG GGATCTTCCCTATAGTGAGATTCCTCTGCTTTCTAAATTCTTGTTTTTCTTGTGTCTGCA GATTTGGTATGATAATGTTCCTCATCCGAAACTTGTAGAATACAAGAAAGATCAGAATTG GGTTCGTAAATCTGGACCTTTCTTTGTCTTCCCTGGAGGTGGAACTCAATTCAAAGACGG TGTTATTCACTACATCAACTTCATACAAAAGGTAAAAAAACATATTTACATATCCAAAAG ATTGATTCAGTTTTACTGAGTTACTGTTTTCTTTTTATAGACGTTACCTATTCTTGATTG GGGGAAGAAAGTAAGAGTGGTTCTATGGG |
| GenBank Accession | BX001493 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:20812421 - go to primer design |
| BLAST e Value | 2e-160 |
| Hit Clone Code (BAC ID) | F18O21 |
| Hit Gene Code | At3g56080 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit F7K9
| Sequence (A. th genome BLAST matches underlined) | >29-K016871-022-356-E04-8409 TATCATGAAATTTCCCGGACATGAAGCATTTACTATGGGCATCCTCTCTATAGCGAGACC CTGATGATCCGACTCTACTAACTGAGCCTCCTACCCCATCGAGTTACATAGGCGCGGTCT ATGCTAACCCATGACTCTTGCTTAATAACTGTTAAAGGGAATTTGCTGATTTGAAAGCTT GAATAGTACTAAATGAAAGACTACGTCGTGCTGAGAATAAAATGGCTATCATTTATAAGG AAAGGGCATTCACCCTATGGGATCCTCCCTATAGGGACGAAAGACGAACTCACATTCACC CCTGTTTGCTACACGCCTACACCTTCCTCCCTAAGGTGAGACCCGCTATCTGCCTATCCC AGAGATTGTTTCTAGCTTTACCGCCGCGCTGCTTCCTCGAAAGGCACACTACCTATTCTG TGTCGAGCGAAGCTACCAATACTCTTCCTACCGTATCCACCCCTGACGATAATCCAANAA CTGTTGTTTGTACACTTCACCAACCTACGGGATCCTCCCTATAGTGAG |
| GenBank Accession | BX001494 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:3965334 - go to primer design |
| BLAST e Value | 6e-12 |
| Hit Clone Code (BAC ID) | F7K9 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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