SimpleSearch - Line and FST details


Line specific information

 
Line ID 356H02
Vector Used pAC161
Line Availability available as T3 set from NASC (N434166)
Segregation Analysis 50:48:42
Confirmed for Hit At1g04800
Parent of DUPLO pair none
Parent of pair(s) 11941

Gene hit At1g04800

 
Sequence (A. th genome BLAST matches underlined) 
>16-K016871-022-356-H02-8409
TGATCTGAAATTTCCCGGACATGAAGCCATTTACATTGAAGACAAGTGCAGGCCGGTCAC
TATCCTATGGGATACTCCCTATAGTGAGAAAGTCGCCGAATTCTTTTTTAAAGCCCTTCT
TGTGGAGGAGAGGATGAGGGTGAGGGTGAGGAAACAAGGGCTTCTCATCACCAAACTCTG
CTTCTCCCATAGTAAAATCTGTGACCAAAGCAAACACCAAAACAAACACACGCACTTTAC
CGGCGATTAGACCCATTGTTAGTGGAAACTTAAAATGTTTGTAGTTAAAATATTAGAAGC
TATTGGAAGAGGATGTTTTGATACGAAATTGCTTCTTGCATGAGCAGTATATATATAGAC
TTAGAGAGAGATCGTGATAGCATAAGCACTTTTCGTCAATGTGCATGGATTCAACCTGTA
CAACAACTATGGGATCCTCCCTTATATAGTGAGAANNTNCNNNNAAAANNTNACANTTAC
CTGAAATGTATGTCGNNTTCTCGATAAGGATGCTTCCTATGTTAAACATGACTAGNATCG
GGGCTTCTTCGNGCAAGCAAAAGTGAATAAAACGATTAAACAAACCCTTGTGGCATTTAA
AATTGATTTTAAAAAGGTATTTTGTTTTAACTAAAGGGGAATAAATGGGTAGTATTCACT
TTTCCTAAATCAACAAAAAATTCTTTAACTTATATATTTTT
GenBank Accession BX001538 [GenBank]
Graphic View Graphic view of gene At1g04800
Predicted Position of Insertion Chr1:1349040 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F13M7
Hit Gene Code At1g04800 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glycine-rich protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX001538 [GenBank]


Last Updated on 10.06.2021 13:37