SimpleSearch - Line and FST details


Line specific information

 
Line ID 357B05
Vector Used pAC161
Line Availability available as T3 set from NASC (N434193)
Segregation Analysis 50:46:35
Confirmed for Hit At5g47580
Parent of DUPLO pair none
Parent of pair(s) 2083

Gene hit At5g47580

 
Sequence (A. th genome BLAST matches underlined) 
>34-K016834-022-357-B05-8409
TGATCTGAAATTTCCCGGACTGAAGCCATTTACAATTGAATATTGTATTCTTTGCTTATA
ACTGAATACAGATGTTAACAACATCAGTGATGACAAGAATCCCTAAAGCCATAAGATTCA
TGAGGAGATCATTGTTGTCCATAATACCCAGAGAAGGCATCGAATTACCCATCACAGTAC
ATACAAAGACGGTGCTGCTGAGTTTAGCTAACTGATCCTGACGACTCGGCATGGAAGTGT
TGAGATCCACAGAGAGTTTGATTCCGACAGCGATGAAAGTCAGAGAAGTGGCGTTGAGAG
AGAAGAACTTACAGGGAAACCAGAATTTGCGGTGTCGGAAGCCGTGTATAAGATCGGCGG
CCATGGCTATGGATCTCCCCAATTATAGAGAGAACNAATCCACNCATGGAACCAAATCAT
CTCCAGCAAAGATATCTCTTTCTTTCTTTTTCTGATCCTAAATCGACGCTTGAGGTTTTG
GATTTCTCTTTATGGGAATTTCTATGGGATCTCGCTTATAGTGAGGACAAAACATCGGAT
CGTTAGACTTTTTGTTTCAACTTGAACAAGGAACATTCCGCAAGTTTTTGATAAGACCTC
TAATTGGAATCTTTGACCTAAATGGGAAATGGGGGATCCTCTA
GenBank Accession BX001578 [GenBank]
Graphic View Graphic view of gene At5g47580
Predicted Position of Insertion Chr5:19296775 - go to primer design
BLAST e Value 8e-175
Hit Clone Code (BAC ID) MNJ7
Hit Gene Code At5g47580 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transmembrane protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX001578 [GenBank]


Last Updated on 10.06.2021 13:37