SimpleSearch - Line and FST details
Line specific information
| Line ID | 357D09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N434221) |
| Segregation Analysis | 50:50:34 |
| Confirmed for Hit | At2g24150 |
| Parent of DUPLO pair | 8018 |
| Parent of pair(s) | none |
Gene hit At2g24150
| Sequence (A. th genome BLAST matches underlined) | >68-K016834-022-357-D09-8409 TATCCTGTTATTTCCCGGACTGAAGCCATTTTCCTCGACGATCATAAGCGATATTCCTGC TGCCTCCAAACGCCAGAAGAAGACGTTGAAACGTTTTGAGTGACAAGCAAGGAGGTGTGA ACCCGAACTGCAGATTAAACAACCCATTGCTCCGACTAAGTACACGAGCCACGGCCATTT TGGAATAGCTTCTCCTTGTGAGGTAAGACATGAGATGTGATGTGTCACGTTCGAATCCTG TTACAGAGAGAATCTTTTAAAGCTTAGTCATGTGAATGAGTAAAGCATCATTCTTTATTC TTTCCTCAAAAGTTTATGTAATCTTTTCAAAAAGTTTGGTGGGTTCAAAGCTCAAGAGAG AAGAAAAGATCCTAGACATATCGAAAACAACAACACATGGTGGGGGGCAATTTACCACTA CTTTACATGATTAGAAAATGACAAAGATTTGATCCCAACAAAAAAAAAGGGAATATGGTT TTTGAATATGGCCCCAACCATATTATTTTTCTGGCAACAACCGTATTTTTTTCTTTCAAC CCAATAAATAAATTTTAAACCGGAAGAAATATATTTCCGTTTTCCCTTTACCCGAAAAAA CGAATTAATATTGGCATGGTCCACATAAACCACCCTTATTAATTTTAAAATCTCCGCCAT TAAAATATTGGAAAATGGCCCCCATAAAATAAAATAAAGGCGCGCTTTAAAAAAATTTCA AAGAATCCCAAAAATTTTCTGAAACCCAATTCTGATTTGTTTGAAAGGAAATCCTCCCCT TCATCCCCGGGGCCCCCGAAAGAAGCCTATTATATTTTATTGGGGGGCTTTTAAAACAAA A |
| GenBank Accession | BX001615 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:10266090 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F27D4 |
| Hit Gene Code | At2g24150 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | heptahelical protein 3 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g56770
| Sequence (A. th genome BLAST matches underlined) | >68-K016872-022-357-D09-8409 ATTTCCCGGACTGAAGCCTTTACATTGAATATATTCTTACCAAACTTTTTCCGTAACAAA TTTTTGATCAAAAAAAAAAAAAACTTTTCCAATTTACCTCCTACCCTTTCAATTTTAAAA CGGGATTAGGGGGGTAACATCCCATTTATTTTGGGAAAACAAAAACCCTTTTTTTTGCCC TACCAAATGGCGAAGGGTTCCCGTTTGTTTTCCCAAAAGGGGAAAAAAATTTAATCCCGG GTTTCCAACTGGAATTTCCGGGATAAAATTTGGGTTAATTTCCCGTGGTTTCTAACCAAA ACCAATAAGTTCCCCCTTTATTGGAAACAGTTCTAACTTAAGGCGGTGGAAAAATTCCTT TCCCGAAAAAGCCAATCCGGGACCTTTTTAAAGGGGTTCAATTTTTGGAACCACCATTGG GATTCTTAATACCTTAACCAAAACTTTTTTGGTTTTGGTCCGTTCCAACCCAAAAAAAAG GGCTTTTCCCTAGG |
| GenBank Accession | FR808713 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:22962823 - go to primer design |
| BLAST e Value | 7e-12 |
| Hit Clone Code (BAC ID) | MIK19 |
| Hit Gene Code | At5g56770 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | transcription repressor-like protein |
| Insertion Classification | 3' region |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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