SimpleSearch - Line and FST details
Line specific information
| Line ID | 357E02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N434226) |
| Segregation Analysis | 80:73:55 |
| Confirmed for Hit | At5g50740 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 12553 |
Gene hit At5g50740
| Sequence (A. th genome BLAST matches underlined) | >13-K016834-022-357-E02-8409 TGATCTGAAATTTCCCGGACTGAAGCCATTTTAATTGAATATATCCTGATTCCAACTCTT TTCATTTTACTGAAAGTACTGTGTACTGTGTAAGACCTTTTTAAAACATTGCAATTTGAA AAAAGCATGTGATTAGTGAATCTTTCATTAAAAAAGAAACTCTCATTCACCTGATTATTG TTATTATAATCATATAGTTACAAACCGGTCTTCTTCACATATATTTTTGTTTGTTTTGAG TGTTTCAAGATTACATAAATAATACGAATTGTGTTGAATCGAGGCTAACTTAAGTCAACT ACTTTACTTTTACTTCACCTATTCCCCAAGAATCCCAAAGTTCTAAACACTTCTTTAATT AGGGTTTATGTTTCATATATCCTGATTTTGTACTTATCTGAAATCAAATTTATATTTATA ATGCCATCAATAAGTTGGACCAGATTTTATATTATGAAAGTGAGGCTAATTATGTTAGGT AGAAATTTATTGGCCAAAAGATTACATTGGTGACTACTACTGCCTATAGAATTGATATTA GCTTTGTACAAAGATCTCATTTGATAGTTAATTTGAATTTTTTTGCAAGGCTTATTATGT TATCATAATATATAGTTAGCTTACATTTTCATATAGAGAATAAAGTCAAACTGCCTTTAA ACATATAGGAGTGGAGTCTGTGGAACCAGATTTTAAAGCATCACAAGTGAGCGTGAAAGG AGTTTTTACGCCGGAAAAGCTAG |
| GenBank Accession | BX001619 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:20637008 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | MFB16 |
| Hit Gene Code | At5g50740 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Heavy metal transport/detoxification superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g07672
| Sequence (A. th genome BLAST matches underlined) | >13-K016872-022-357-E02-8409 TGATCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATATTGGAGGATGTCCGCTT TGTGTTACCTATGCGGGATCACAGCCGATTGCACAGAGAGTGCACCATATGCTGTGTGAA ACACCGCACAGATGCGTAAGGAGAAAATACCGCATCAGGCGCCATTCGCCATTCAGGCTG CGCAACTGTTGGGAAGGGCGATCGGTGCGGGCCTCTTCGCTATTACGCCAGCTGGCGAAA GGGGGATGTGCTGCAAGGCGATTAAGTTGGGTAACGCCAGGGTTTTCCCAGTCACTACTT TGTAAAACGACGGCCAGTGCCAAGCTTTGTGCTCAAGTGATCTGGGAGGGTGTCAAACCT CCCCCAGCCCCTTATTCAGGGGATGGTGCCAGGGAGTTTGAACTGTTAACAAAAGATTTT CTCGATACAGAGAACAGCCCCACTCCTATGGGATCCCGCAAAATAGTGAGATCGCCCCCA AAACGGGAAAAAACAACCCCTTTGGGAGGGGGCTTTCCCCCTAAAATTTTAAACAACATA TTGAGGGGCGGGGTTTTCTCCTTTACCGAAAATTTTTATTGAGGGCGCACCCAGGGTGGG GGCAAAATTTGAACCTGGGACTCCTTGGTAATAGGAGATCCTCTAGTGCCAAAAACA |
| GenBank Accession | BX001620 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:3257572 - go to primer design |
| BLAST e Value | 7e-61 |
| Hit Clone Code (BAC ID) | T5M2 |
| Hit Gene Code | At2g07672 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | hypothetical protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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