SimpleSearch - Line and FST details


Line specific information

 
Line ID 357G03
Vector Used pAC161
Line Availability available as T3 set from NASC (N434251)
Segregation Analysis 50:44:35
Confirmed for Hit At3g56680
Parent of DUPLO pair 8247
Parent of pair(s) none

Gene hit At3g56680

 
Sequence (A. th genome BLAST matches underlined) 
>23-K016872-022-357-G03-8409
ATTTCCCGGACTGAAGCAACGAACGAGAGGGAAAGGAAACTTTATATTTTTTCCTTCTTT
ATTTTTTATTTTTCTCCTTTTCATTGAAAATAAATATCTCATATAATTTTAATTTTTTAA
ATATAGTTTTTCTCTTCTATTTGGACCCACGATAACATGTGTAGGTATACTATATAGAGC
TTATATTCTAAACAAGCATTTTGAAAACATTTCTTTCAAAACAGAGACTCTAAACAATGT
CCGTGCTGATTGTCTTGGTAAGAAGGCAAGAGCACGAGATTCTATTTTTTCCCATGTAAG
TTCTTCTACTCCGAACTATTTTTCTCTCGCTGAAAACCGACCCGATTTTAGCTTAAATGG
ATGACCTTATTTTGCCGAAAAAAACAACAACAGTAAAAGCATATAATAACTCCAATTTTC
ATTGGTACGGACATTTTTGCCCTTAAACTATGAGCTGGAGTTGAGAATGAGGTGAAAAGA
ATGCGTTTATCTTCATAAAAATGCATCCCCATCTCTGATTCAAATTCAAGTTTCTTTGGA
CATTCAGAGATATATGGCTTACATAGTGGATTTGCATCTTCAACGGTAGACGCGAAGCTA
TGACGGTAGCACAAAGATTTGGTGGTGGTTCACGGCTTTGACGGCGAGGGGTAACGAACG
ACGTCAATGGTAAACGCTATACCCTATGG
GenBank Accession BX001652 [GenBank]
Graphic View Graphic view of gene At3g56680
Predicted Position of Insertion Chr3:20991290 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T8M16
Hit Gene Code At3g56680 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Single-stranded nucleic acid binding R3H protein
Insertion Classification TS2TE (5')
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37