SimpleSearch - Line and FST details


Line specific information

 
Line ID 358G08
Vector Used pAC161
Line Availability available as T3 set from NASC (N434352)
Segregation Analysis 50:45:42
Confirmed for Hit At4g13950
Parent of DUPLO pair none
Parent of pair(s) 1212

Gene hit At4g13950

 
Sequence (A. th genome BLAST matches underlined) 
>63-K016873-022-358-G08-8409
GATCATGAGATTTCCCGGACTGAAGCCATTTACCATCACACATGAAGGTAAGATCCAAGA
AATTGCCAAAATTGGAAGCTTTTTGGCCGAGGCAAGTAAATTATATGATTAAGCTTTTGC
ACTCAGCTGAGGTATATATGTGTTTTTGACATAAGAATTGTTATAATATATGTAACTCTG
CCACTATGGGATCCTCCCTATAGTGAGAANGCAATGCANAGGAAATAACCGGGGCCCCCC
CTACGCTCGCGGGGATGCGCACGCGGCGCGAATCCCCGGCAAAGGCCCCTGGGGGGGCTC
ATCTGCCTAATGGAGGTAGAGGAGGGCTAGACAAACAAGGTGGAGAACATAGGGGAAGTG
CCTATATTTTTTTTCTCCTCCCCCCCCCCCCCTAAAGAGATGGTATATTCCCAAGGGGAT
CCTCGCTAAAAAAAGAAAAAAAAAAACGGGGGGGGGGGGGGGGGTAAAATATCCCCAACC
CAAACAAACACAAAGAAGTGCGCAGCAAAAAGGGCGGCGGAGGCGAACGATGCCGGGGGG
CCCCCCGAAACCATGCCGCGGCGAAAAATAAAACCCGACGCCCGCACCCATACGCAGCCG
CACCACGCGGAGAAACAACCAAAAAAAACGAAGGCCCGCCGCAAAAAGGAGGGCGGACAA
AAAGAGAGAAAGCAA
GenBank Accession BX001780 [GenBank]
Graphic View Graphic view of gene At4g13950
Predicted Position of Insertion Chr4:8058275 - go to primer design
BLAST e Value 8e-61
Hit Clone Code (BAC ID) FCAALL
Hit Gene Code At4g13950 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ralf-like 31
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g56340

 
Sequence (A. th genome BLAST matches underlined) 
>63-K016835-022-358-G08-8409
GAGTCTGAGTGAAAGAACATCATTTCTATGTACAGTAAAGCAGAGAATGAAATGCAGAGG
AAATAACAAGTTCAATAGCTATGGGATCTCCCTTATAGTGAG
GenBank Accession BX001779 [GenBank]
Graphic View Graphic view of gene At5g56340
Predicted Position of Insertion Chr5:22819711 - go to primer design
BLAST e Value 1e-37
Hit Clone Code (BAC ID) MCD7
Hit Gene Code At5g56340 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box superfamily protein
Insertion Classification TS2TE (3')
Confirmation Status unknown


Last Updated on 10.06.2021 13:37