SimpleSearch - Line and FST details


Line specific information

 
Line ID 359A07
Vector Used pAC161
Line Availability available as T3 set from NASC (N434375)
Segregation Analysis 50:47:46
Confirmed for Hit At5g03820
Parent of DUPLO pair none
Parent of pair(s) 79476, 79558, 79640, 79654

Gene hit At5g03820

 
Sequence (A. th genome BLAST matches underlined) 
>49-K016877-022-359-A07-8409
TGATCTGAGATTTCCCGGACATGAAGCATTTACAATTGACAGCAAACGTGCTAATCGATG
ACAAGATGAATGCAAGTCTTGGAGATTTCGGATTGGCTAAGGTATATGATCAAGGATATG
ATCCTCAAACCTCTATGGGATCTCCCTATAGTGAGAGNNGNCCANNCNANTCACCCCCCG
CGTTTGCGAGGGCTACCACCCGCGACCGTGAGGAGGAGAAATTGGCTTCGCTGAGGCGCT
TGACGCGGTGGTTGTTGCCCCCCTCGACAACTGAATCTCCCATTATGATTACAGCCGGTA
CAAGTGGCTCACCGGTCCCAACGCCGGCGTAGAAACAGGCGATAACCGAAAAGGTCATCA
TCATTATAATAACCATCTTCCTTTTCTGTTTGAAATAATGTAGTAAAAGATAGAGATAGG
AGTGAGTGAAGAGATAGGGTTTTAAAGGAAGATAGATTAAGGAAATTACATTCATTTGTT
TGAAGCTTGCATGCTTCGGTAATAACGTCGCATTGGAATTTAAAGATGGGAGACCTTAAC
ACGCGATTCATCCACAAGAGGACATACGACACCTCTCACATTTTTCGTGCAATCACAACG
GGCAAATTAAAGGATTGTTTTATTTT
GenBank Accession BX001811 [GenBank]
Graphic View Graphic view of gene At5g03820
Predicted Position of Insertion Chr5:1016928 - go to primer design
BLAST e Value 5e-176
Hit Clone Code (BAC ID) MED24
Hit Gene Code At5g03820 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GDSL-like Lipase/Acylhydrolase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX001811 [GenBank]


Last Updated on 10.06.2021 13:37