SimpleSearch - Line and FST details


Line specific information

 
Line ID 359F04
Vector Used pAC161
Line Availability available as T3 set from NASC (N434432)
Segregation Analysis 50:45:43
Confirmed for Hit At1g29240
Parent of DUPLO pair 12684
Parent of pair(s) none

Gene hit At1g29240

 
Sequence (A. th genome BLAST matches underlined) 
>30-K016877-022-359-F04-8409
TTTCCCGGACTGAAGCCATTTTTGAGCGGTCATGCGGCCGCGATAGGCCGACGCGAAGCG
GCGGGGCGTAGGGAGCGCAGCGACCGAAGGGTAGGCGCTTTTTGCAGCTCTTCGGCTGTG
CGCTGGCCAGACAGTTATGCACAGGCCAGGCGGGTTTTAAGAGTTTTAATAAGTTTTAAA
GAGTTTTAGGCGGAAAAATCGCCTTTTTTCTCTTTTATATCAGTCACTTACATGTGTGAC
CGGTTCCCAATGTACGGCTTTGGGTTCCCAATGTACGGGTTCCGGTTCCCAATGTACGGC
TTTGGGTTCCCAATGTACGTGCTATCCACAGGAAAGAGACCTTTTCGACCTTTTTCCCCT
GCTATGGGATCCCCCCAAAATAGTGAGAANATTGNGCTTTANNGACTCTCTCGGCATGCT
GAACACAGGGCCTGGTTTTAAAGCTAAACACAACTCTCCAATAACATCACCAAGTCATGA
TCAAGTGAAGTCAAGCAAGGTTGCTCAACTCAAATATCGATTCCAATCTGTTAAAAAGGT
TCCACCCTATAGACTCCTATTAGTCCCTTATAAATATGATTAGACACTCACTG
GenBank Accession FR808767 [GenBank]
Graphic View Graphic view of gene At1g29240
Predicted Position of Insertion Chr1:10218457 - go to primer design
BLAST e Value 5e-96
Hit Clone Code (BAC ID) F28N24
Hit Gene Code At1g29240 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation transcription initiation factor TFIID subunit, putative (DUF688)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR808767 [GenBank]


Last Updated on 10.06.2021 13:37