SimpleSearch - Line and FST details
Line specific information
| Line ID | 360C11 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N434499) |
| Segregation Analysis | 69:64:58 |
| Confirmed for Hit | At4g26330 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At1g02965
| Sequence (A. th genome BLAST matches underlined) | >83-K016880-022-360-C11-8409 GATCTGTNATTTCCCGGACATGAAGCCATTTACATTGAATATATCCTAGTAAGACATCTA CATCGCCATTTCGCTCTGAGTTTACTTTCTCTTATTATTAGTAATGTGGGCTTTAGTAGG CCCAATTCCCATGCTTTATATCCCACATTTCACAATTAATCACACATTAATCTGGCAATT CCTTAATTTCACATCCTACGGGATCCTANCTATAGCGAGATCTATGGGATCCTCCCTATA GTGAGAAACGGACATGCACATTGACCATCCAACCGTGAAGATAGCTCAGCGCGGACATAC CGACTCCACAGTCTGGGAGATGCTCCGGCAATTGACTCGGCGGAGAAACCTGTCGTACAT GTCGGCGAGAGTCTACCGAGAACGCAGCACGATCGCACCTGTGACCGACGAGGGATCACT CTATGCGACTTGCTCTCTCTGCCTCCCTGGATATACGTGACAATGCGCGTCAGCACATCA CCCTGAAGATTCGAGACGACNTCTGCTCCGACGACGATAGCTCCCTCGACTGAGGATATG TTCTCTCCTCAGAGGAAGATACATACGTACATTTTTGACTTGACAAAAGACCAATCCCAT GAACTTATGACAAAGCTCTC |
| GenBank Accession | BX001963 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:672742 - go to primer design |
| BLAST e Value | 2e-40 |
| Hit Clone Code (BAC ID) | F22D16 |
| Hit Gene Code | At1g02965 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | hypothetical protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
Gene hit At4g26330
| Sequence (A. th genome BLAST matches underlined) | >83-K016878-022-360-C11-8409 GATCATGAGATTTCCCGGACTGAAGCCATTTACATTGAATATATCCTGTTAGTCTCAACA TCGGCCATGACCTGTAGCTTTACTTATTCTCATTACCATAATGAGGGATTTAGTCTGACC ATTGACCTGCTAATTTTGATTTGACCCACATTAGAGCACTGATTAATCAGCGCAACTTAT AATATATAGATTTAACGTGAGCCTAGCGAATGCGGGTGCTATGGGATCCTCGCCTATAGG GAGAGACTTTGATCCATCTGTACATTGCAATCGTAAATTGATCGGAGCTCGATTTTACCT CACAGGATTCGAAGAGACGTACGGAACAATTGACTTTACGCGAGATCCTGAATACCGATC GCCGCGAGATTACCTCGGTCACGGCACACACACAGCTTCCACCGCCGTCGGATCCGTTGT TCGCAATGTCTCCGGCTTCTTCGGTCTTGGACGCGGCACTGCTCGCGGCGGAGCTCCATT GGCTATGGGATCTCCCCATCGCCGGAGAGGACGAAAGCTCCCTCACGTGAAAATATGTTA TCTCATCAGTGAAGATACATACGTACATTTTTGACTTGACAAAAGACCAATCCATGAACT TATGACAAGGCTCTCTTCGTCGCTA |
| GenBank Accession | CR396449 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr4:13320877 - go to primer design |
| BLAST e Value | 2e-129 |
| Hit Clone Code (BAC ID) | T25K17 |
| Hit Gene Code | At4g26330 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Subtilisin-like serine endopeptidase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
