SimpleSearch - Line and FST details


Line specific information

 
Line ID 360H12
Vector Used pAC161
Line Availability available as T3 set from NASC (N434560)
Segregation Analysis 50:39:27
Confirmed for Hit At4g25920
Parent of DUPLO pair none
Parent of pair(s) 67816, 96795

Gene hit At4g25920

 
Sequence (A. th genome BLAST matches underlined) 
>96-K016878-022-360-H12-8409
TTTCCCGGACTGAAGCATTTACTACTGAATATATCCTCTTTACCTAAACGAGACAAAAAT
TGGGTAGTTGTTGTCAAGTTATTGGGATCTCAGTTGAGTATGTGCAGGCCTTTTGGCAGC
CGTAAATGGATCAACATCCAAACCAAGCCTCAGAATATAAACCCTTCATCGAGCATCATG
TTTTCCAAGAAAGAGAAAAAGTTCTACGTTCCAACTCCCGGAGGCAACATCTTGTGCTAT
TTGGATCCTCACTCAGAGGACGACGACCTAATTGATTTCGTGGAATTGGAGTTTGACGAT
CTTCCAAAATCGGTGTTTCAAGAGTTGGCCGACGTGAGTACATGTTCTATGGGATCCCCC
TATATAGTGAGANNAAAAAANANNGNTTNTTTACCCTTTTTTTTTCAATTCAAAAAGGTA
GAGGTCC
GenBank Accession BX002039 [GenBank]
Graphic View Graphic view of gene At4g25920
Predicted Position of Insertion Chr4:13166001 - go to primer design
BLAST e Value 2e-178
Hit Clone Code (BAC ID) F14M19
Hit Gene Code At4g25920 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein (DUF295)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g02950

 
Sequence (A. th genome BLAST matches underlined) 
>96-K016880-022-360-H12-8409
TGATCTGANATTTCCCGGACTGAAGCCATTTACATTGAATATTTCCCGGATATGTAGAAA
CTCTGTTATTTCTTCATTACCCAAAATCTAAGCTTTCGTCGCCGGCGAAACCGTAACCGC
CACCGGAGGTTCTGTCCACCTTTTTTGCTCTCCGATTATTTTCTTCGTCTCTCGTATGAT
GTACTGTTTTTGCTTTAATGGAAGCATATACTGAAGCAATTTCTGCTTTTTTTTGTTTCT
TCGTTGCCTATGGGATCCTCCCCTATAGTGAGACNACCTAATTGATTTCNTGGAATTGGT
TTTTGACGATCTTCCAAAATCGGCGTTTCAAGAGTTGAACGACGTGAGTACATGTCCTAT
GGGATCCTCCCTATAGTGAG
GenBank Accession BX002040 [GenBank]
Graphic View Graphic view of gene At5g02950
Predicted Position of Insertion Chr5:690736 - go to primer design
BLAST e Value 7e-92
Hit Clone Code (BAC ID) F9G14
Hit Gene Code At5g02950 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Tudor/PWWP/MBT superfamily protein
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37