SimpleSearch - Line and FST details


Line specific information

 
Line ID 361C06
Vector Used pAC161
Line Availability available as T3 set from NASC (N434590)
Segregation Analysis 50:49:34
Confirmed for Hit At5g17980
Parent of DUPLO pair none
Parent of pair(s) 5279, 5285, 5286, 5310, 5361

Gene hit At5g17980

 
Sequence (A. th genome BLAST matches underlined) 
>43-K016993-022-361-C06-8409
TGATCTGANATTTCCCGGACTGAAGCCATTTACTATTGAATCTGAGACATTACGACGTGA
GCAAGAGGTGCCGCTGTTGGCCTGCTGGGTTATGACGGCGTCTGTACCGACGACCATGAC
TTGACCAGCCGGCCGTGCCGTACTGCCCATCCCCGGCATAGCGACAACTCTGTTTTCCAT
ATACATCACCGGCACCAGGCTACGACTCTGACCCGGAGCTGGGCAGGATGCTTGACCACC
TACGCCCTGGCAACGTTGTGACAGTGACCAGGATATGCGATCCTCCCTATAGTGAGACTC
CGTCATGGAACGAAGATCTACTCTTCGTAGCCGCCGAACCTTTCTCCGATCAGCTTGTTT
TCACGTTGGAGTATCGAACATCGAAAGGACCAGTCACCGTCGGAATGGCTCGCGTGCCAC
TCAGCGCAATCGAGAGACGCGTCGACGATCGCTTGGTTGCTTCGAGATGGTTAGGATTGG
AAGATCCAAACGACGAGAAGAGAGGAAACAGATCTATGGGATCCTCCCTTATAGTGAG
GenBank Accession BX002082 [GenBank]
Graphic View Graphic view of gene At5g17980
Predicted Position of Insertion Chr5:5955166 - go to primer design
BLAST e Value 2e-120
Hit Clone Code (BAC ID) MCM23
Hit Gene Code At5g17980 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX002083 [GenBank]


Last Updated on 10.06.2021 13:37