SimpleSearch - Line and FST details


Line specific information

 
Line ID 361H06
Vector Used pAC161
Line Availability available as T3 set from NASC (N434650)
Segregation Analysis 50:42:31
Confirmed for Hit At2g36380
Parent of DUPLO pair none
Parent of pair(s) 4366, 4392, 4403, 4508, 4665, 73624, 73636, 73654, 73655, 73656, 73657, 73658, 73659, 73660

Gene hit At2g36380

 
Sequence (A. th genome BLAST matches underlined) 
>48-K016997-022-361-H06-8409
TGATCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATTTTATATAGCCCGTATGGGA
TCCTCCCTATAGAGAGATATAAGCCATAGGTTGATCTCTCAAGCGCCGCCCATCGGAGCT
CCACGTCATCTTCTTCTCGTCTATCGCTCCGACCAAACACGTCGTCCGTTGGGGGAGCAA
ACACATCTCTGAAGCTTTTTGAAGCAGCTCCGGCTAAACTCCGGTGACTTGTGGAGCCTA
AACTTCCTCTCCCGCTCATTGTTCGGACCAGATCTTCATCTCGTCCTAACATCGCCGCTG
AGTCGTCCGGTTTTACTAATGAATGTTCGAGACGATTTAGTTTCCGGCGACCATTTAAAG
GGGAGAGAGAAACTCTGGAGTGAGAGAGAAGAGAGAAGAGGCGAGTTTAAAGGCTTCGAG
TGACAATATTTTTTTTATTTATAATACAATTTTTTTTTTGGCCGGTTTCCTTTGGCCTAG
GGGATCCCCCCCAAAAAGGGGGGANNNNNNNNNNNNNNNTNNNNNNNNNNNTTTTTTNNN
TTNNNAAAATTNNNNGGGCCTNTANNNTTTATAAAAAAAAAAAAAAAAAAAATATTATNA
AATATAATTAAANNNTNNANAAAAAAAAAAAAAATAATAATATTTTNTTTATAAATTATA
TTTTTTATTANAANTACGAGANTATAAAATTTATATATATTTATAAAATTTAAAAAAANA
AATATTTATANTAAATAAAATATAAGAATAGATATAAATTAAGAGGTAATTGTTTAATTT
AGAAGAATGGGAGAAAGAGTTGAGAGAGGGGAAATTGGGGGGGTGATAAATAATAGAAGA
GGAGATAAGAAATT
GenBank Accession BX002158 [GenBank]
Graphic View Graphic view of gene At2g36380
Predicted Position of Insertion Chr2:15257816 - go to primer design
BLAST e Value 2e-150
Hit Clone Code (BAC ID) F2H17
Hit Gene Code At2g36380 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation pleiotropic drug resistance 6
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX002157 [GenBank]


Last Updated on 10.06.2021 13:37