SimpleSearch - Line and FST details
Line specific information
| Line ID | 362D05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N434697) |
| Segregation Analysis | 100:77:64 |
| Confirmed for Hit | At3g19590 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At3g56230
| Sequence (A. th genome BLAST matches underlined) | >36-K016994-022-362-D05-8409 TTTCCCGGACTGAAGCCTTTACAGTAGAATATTTTACTTTAGTTTTTTTTTCTATTTAAT TGGTACTTTTGAAATTGTTTACATAGACATCAAACGCCATTGAATTCTTTATTTAAAGCC CTAGTAAATTATTGTATTTTTAAAATCGTCGAACATCCTATTATAAAACTAACCATGCCA TAAAATTAAATTTTAAAAAAGAGCATCTATGGGATCCTCCNCTATAGCGAGAATGTGTGA CCGGTTCCCAATGTACGGCTTTGGGTTCCCAATGTACGGGTTCCGGTTCCCAATGTACGG CTTTGGGTTCCCAATGTACGTGCTATCCACAGGAAAGAGACCTTTTCGACCTTTTTCCCC TGCTATGGGATCCTCCCTATAGTGAGACGTAGACCGATGCAAGGGCACTCGATTGCCCTT AGGGATACGGACATGTGTGTCTATATGATCAGAGGAGAAGGGAATTCGGGCATGCTACAC TATGTTGACGATAATTTTCTCCTTGACATGGAGGTCCAGCAGACTCTGGATGACCTGCTC CCCAGTCTTGACAGTGAGGACTCTCAGGTCCTCTATATGAATCCTTGACTCCATGAGAAC TGGGGATCCTCTA |
| GenBank Accession | BX002219 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:20861439 - go to primer design |
| BLAST e Value | 2e-49 |
| Hit Clone Code (BAC ID) | F18O21 |
| Hit Gene Code | At3g56230 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | BTB/POZ domain-containing protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
Gene hit At3g19590
| Sequence (A. th genome BLAST matches underlined) | >36-K016998-022-362-D05-8409 GATCTGTAATTTCCCGGACTGAAGCATTTACATTGAATATATCCTGGAAAAANAAAAGAA GACACAAGGAATATACTTTTTAGCTTGAGCAGCCTCTGACAGATCAAAAAACTCCATTGC AACCCTTCCTTCAACAGAGCTAAGAGCATAGCCTGTAAATTTTCAATTTCCGAAATTCAT TGGTATGGAAGAAGAGGAACTGAGAGTATACTTTGGAATTGGAAGAAAAAATTAGCAAGG ACAGAAACAATATGTCAGTCATCTAACCTGTTCCATTAGGATAACAACGCACACATCTCG TCTGGTATTTCAGTGAAGACTCCCTTCTTTGCTCAGGCTGAGACATATTTCTGAGATCAT AGATGTTTACATGCCTCTCCTGCTGTAGCCACTACCAAACGATGTCCAACAAGAGACATA GAGTAAACACGTTCTGGTTGCAAATATGTTCCCACTTGGGTGCGTTCAGGCCCACTATGG GA |
| GenBank Accession | BX002220 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:6807195 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | MMB12 |
| Hit Gene Code | At3g19590 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Transducin/WD40 repeat-like superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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