SimpleSearch - Line and FST details


Line specific information

 
Line ID 363D04
Vector Used pAC161
Line Availability available as T3 set from NASC (N434792)
Segregation Analysis 100:99:98
Confirmed for Hit At1g27940
Parent of DUPLO pair none
Parent of pair(s) 6302, 6342, 6374, 10616, 10619, 84175, 84197, 84219, 84225, 84232, 84239, 84245, 84254, 84258, 84259, 84260

Gene hit At1g27940

 
Sequence (A. th genome BLAST matches underlined) 
>28-K017000-022-363-D04-8409
AACGACGGGATTCCCTCTTCTCCTTGCGGCTTCACATACCGAAGTAACTCTTAATAAAAA
AAATCCTCTCTACCATATATTGAATCTTGAAACTGAATAAGCTTGAATATGACATTTTGC
AGCAACTATTTTTAAAAGGCTTTGGAGGAGATTACACAAGAGCTTACCCTATGGGATCCC
CCTTATAGTGAG
GenBank Accession BX002329 [GenBank]
Graphic View Graphic view of gene At1g27940
Predicted Position of Insertion Chr1:9735028 - go to primer design
BLAST e Value 2e-52
Hit Clone Code (BAC ID) F13K9
Hit Gene Code At1g27940 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation P-glycoprotein 13
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g28030

 
Sequence (A. th genome BLAST matches underlined) 
>28-K016995-022-363-D04-8409
TATCATGAGATTTCCCGGACATGAAGCCATTTACACTATGATATGGACTATTGTCAAGAG
GTAGAGTGACTATGCTATCCTCGAGATAGTGAGATCAAGCTTTTAACGTTTTATTTTCCT
CCATCAAAAAATCAACATGTGTCATCATCACTCAACATCTTATCTGTGCGGCGACGCATG
ATATCATTGTGCTTATCGCATCGATACATGTTTTATCATCATCATTTGACTGTACGTAAT
CAATGTATCTCGATTCTTTTAGGTTGATGTAGAAAATAATTTGGAGTTGTTTTTAGTTAG
CTCCTAATAATACTATAGAATTACTAATTAGTAATGTGAACCCTCNTATAAGAGAAGCAA
GTAGAGCTATGGGATCCTCCCTTATAGTGAG
GenBank Accession FR808834 [GenBank]
Graphic View Graphic view of gene At4g28030
Predicted Position of Insertion Chr4:13939291 - go to primer design
BLAST e Value 4e-47
Hit Clone Code (BAC ID) T13J8
Hit Gene Code At4g28030 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Acyl-CoA N-acyltransferases (NAT) superfamily protein
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37