SimpleSearch - Line and FST details


Line specific information

 
Line ID 363E11
Vector Used pAC161
Line Availability available as T3 set from NASC (N434811)
Segregation Analysis 50:46:32
Confirmed for Hit At3g18460
Parent of DUPLO pair none
Parent of pair(s) 1155, 9650

Gene hit At3g18460

 
Sequence (A. th genome BLAST matches underlined) 
>85-K016995-022-363-E11-8409
ATTTCCGGACATGAGCCATTTACATTGATATATCCTGGACATGAAGCCATTGCGTTTGGT
TTTGGGAATGTACCTGGTTGTCCCGGTTAACCGTTGGTTGAACTTGAACCGGAGGTGGTT
GTGCTTCATTCGGCTGACTACCTGGTCGACCCATATATATATAGTATTAATTTCCCGGCT
ATGGGATCTCCCCTATAGTGAG
GenBank Accession BX002353 [GenBank]
Graphic View Graphic view of gene At3g18460
Predicted Position of Insertion Chr3:6333845 - go to primer design
BLAST e Value 3e-63
Hit Clone Code (BAC ID) MYF24
Hit Gene Code At3g18460 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation PLAC8 family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g07798

 
Sequence (A. th genome BLAST matches underlined) 
>85-K017000-022-363-E11-8409
TGATCTGATATTTCCCGGACATGAAGCATTTACAATTGATATATCCTGGACATGAAGCCA
TTGCGTTTGGTTTTGGGATGTACCTGGTTGTCCCGGTTAACCGTTGGTTGAACTTGAACC
GGAGGTGGTTGTGCTTCATTCGGCTGACTACCTGGTCGACCCATATATATATAGTATTAA
TTTCCCGCCTATGGGATCCTCCCCTATAGTGAGAAANNCANNCNGNCGACATCNATANTG
TATATTTTCTTCCAACCGCTTGGAACAGAGGAAGAGAAAGGAGTGGTGATGGCTTAAAGA
ACCACGTTGCATAAGCCGGAAGCACAGAATGTTACTCGGAAACAAGCCTGAGAACGACTC
TTCACCGTTAGCCATTATGTTTACCTGGTCAAATGCCGTCGTTTATGATAGGTCGGCCTA
TGGGATCCTCCCTATAGTGAG
GenBank Accession BX002354 [GenBank]
Graphic View Graphic view of gene At2g07798
Predicted Position of Insertion Chr2:3359685 - go to primer design
BLAST e Value 3e-88
Hit Clone Code (BAC ID) T18C6
Hit Gene Code At2g07798 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37