SimpleSearch - Line and FST details
Line specific information
| Line ID | 363F05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N434817) |
| Segregation Analysis | 50:49:34 |
| Confirmed for Hit | At3g24040 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 77060, 77065 |
Gene hit At3g24040
| Sequence (A. th genome BLAST matches underlined) | >38-K016995-022-363-F05-8409 TGATCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATATCCTGAAATGTGATCAC GAATGAAAGCAGCTAATAGCATTACTGATAAACAAGACGTCATGTAATCTATATTCTGAT AGAGCTTTCACCTAAACTTATCCACTTCTACACTATCACGTATCTACCTACCAAATTATG AAATGGTGCCAAGAAACTGCTAACCATGTAAAAGAAAAAGGGATTAAGTTTCTACAAAAC AGCATAATTAGGAAAAAGTAATCTTCCATAATAATATCAATCCAAATGATTGCACAACAC TGAATATGCTAAATAGCAAACAAGGTGGTCAATTAGTAATGATCCACAGATAAATGCAGA AAACAGAAAAGGGAAAATGAAAACGTAATGTAACGTAGCTAATCATACCTGAGAATAACT TGAAAGCCTTACGCAACTCTCGTTTCTGCGAAGCGAAAAACATATCGGTTTTCTCCACAA GATAGAGCCCTGGATCAACAATAACTGGCTTCAACTTCCTGGACCTACAAGAAACCATGA GAAAATGTTACACTGATCCTAAAACAATGAATCTTAGCTCTATGGAATCAAATCCAGCCT ACAACACAAAGACTCTCTAAGTGAAACTAAAGGGAAACATAATCTTACTCTTTCCACCAA TGTAGCTA |
| GenBank Accession | BX002360 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:8681921 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F14O13 |
| Hit Gene Code | At3g24040 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit MOK9
| Sequence (A. th genome BLAST matches underlined) | >38-K017000-022-363-F05-8409 GATAATCGATGAATCTGGAGCTGTCATGTGAAATACATGATTCAGTTTCACCATTACAGA AGAACAATCAGATCAGTTTATAATTTCATAATTTAATCATTTGTGAATCCTAATCTGAAA GTGACCGTTTGGTAAGCCAGAAACGACGTAGTCTATAAAGAGAAGAAGTCAAGTTAGTCA TTTACAAAAAAAAGTCAGTTTAGAGCATTATCTTTGACAAACCACAATTCTTTTGCTGCA AAGGTTAACAAATTTTCACATCTTCCTTAACTCGGCTTGAAACTTTTCGAGGTCTTCAAG CTTTCCATCTGAGAACCACAGAGAACGAAGGAAGATGATAAACATGCAACACTTATTATT ATTCCAACTCTTAAATATCACAACAAATGTTAAATTTTGCTACCAAAAGTCATTGCTGAA AACTCTTTGCCATGGTTCTTTAGCCTCTTTACTTTAGCGCTTTCACTTGCTTTCATTCTT CTTGTTTTCAGCCTCTCCACGCTTGCACGAAGTTCCGATGCCATTTTCGTCATCTCTGCA GAAAACCAATATAAGAGATTCAAGTCATCATCCCTAT |
| GenBank Accession | BX002361 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:13703246 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | MOK9 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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