SimpleSearch - Line and FST details


Line specific information

 
Line ID 365A07
Vector Used pAC161
Line Availability available as T3 set from NASC (N434951)
Segregation Analysis 50:48:38
Confirmed for Hit At1g12010
Parent of DUPLO pair none
Parent of pair(s) 3627, 3659, 7135, 93988

Gene hit At1g12010

 
Sequence (A. th genome BLAST matches underlined) 
>49-K017044-022-365-A07-8409
TATCCTGTAGATTTCCCGGACATGAAGCCATTTACAATTGAAAAGAGCGGAAACGACAAT
TATCGCCAATCACCATCTTTAAGAAGCTGGAGACCACTGACCTTATCATCTTGAAACAGC
AAAATGAGGCCTCCTGCATCTGTGTGAGCCCTAAGCCCTTTGATCATCTCTGGTTTAGGA
CATGGTGGATAGTTGCTAAGCTTTGTCGCAAAAGTTGGACCCGTTGTCCCATGAAACACC
TTCTTCAAGTACCCTTTCTCCAACCCTATGGGA
GenBank Accession BX002533 [GenBank]
Graphic View Graphic view of gene At1g12010
Predicted Position of Insertion Chr1:4057160 - go to primer design
BLAST e Value 6e-111
Hit Clone Code (BAC ID) F12F1
Hit Gene Code At1g12010 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR396457 [GenBank] CR396457 [GenBank]

Gene hit MIK19

 
Sequence (A. th genome BLAST matches underlined) 
>49-K017039-022-365-A07-8409
TTTAATGGGTCTATATAAGAGAATAGACCAACCTTATGAACGGATTTGGGCTCAGTTACT
CGAACCGATTAAATTTACTTTTTTCTATAGAGACCCTCACCTATAGTCTGATACATTAAA
TACTATAATGCTAAGGAGGATATATCAATTTTGTTCAGGTTTACTTGCAGTCTAATACTA
TCTTTTATGTATATATGAAAATAACATTTATACTGATACATACACAGAGAGAATAAAACT
TAGTCATATCTGGCGGTTGTTAGAACTTAGAACTAAAAATTCAATGCTATGGG
GenBank Accession BX002532 [GenBank]
Graphic View Graphic view of sequence BX002532 of line 365A07
Predicted Position of Insertion Chr5:22984888 - go to primer design
BLAST e Value 1e-99
Hit Clone Code (BAC ID) MIK19
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37