SimpleSearch - Line and FST details
Line specific information
| Line ID | 366B09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N435061) |
| Segregation Analysis | 50:48:42 |
| Confirmed for Hit | At1g78320 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 5590, 5686, 5705, 10391, 10985, 10986, 91057, 91075, 91107 |
Gene hit At1g78320
| Sequence (A. th genome BLAST matches underlined) | >66-K017040-022-366-B09-8409 TGAGCCATTTACATTGATATATCCTGACACAAACCCGATTCTCCNTNCAGATCCTTACCA GAGAGCTNCAGCTATGGNATCCTNCCCTATAGTGAGANNNNNNNNNAANNGNNNNTTNNN NNTNTTTNNTTTNTTTTNANNTGTTTTGGTTNNTTTTTAATTTATATTTNTNTTTNNNTN NNNTTNTNNNNTNNNNNNTTTNTGTNTTTTTTTTTTTTTNNTTTTNTTTTTNTTTTTTTT NTTTTTATTTTNTTTTTTTTTTNTTTTNNNTTTTTTTTTTTTTTTNTTTTTNNNTTTTAA TAAAAAAAATTAATTTTTTGTTATTAAAAATATAAATATNAAAAATTTATTATATTTTTN NNNNNTTATAAAAATATATANAAAATATAATATAATATTTTTTATTTGGTAATATATAAA ATAAGGGATTAGGGGGGGGGGGGGGTGAGTAGGGTGGAGAGGTGTTTGATAGAAAGGAAG GGAGGGGAGAGGGGAGAGGTAAGAAAGAATGTAGAGAAAGATAGGATGTTGGGGGGAAAA TGAGTGGAATAAGGAGGAAGAGAATGTTGGGTGGGGGAGAGAAGGAGAAGGGTGAGGAAG AGGACATGGAGGAGGGGGAGTGGGGAGTGTGATGGTAAAAGATGATTTGCGGGGCCGACG GAAGATAAAATGTGTAAGACGATAGTGAGGAAGANGGGTAAGAGAAGAGATGGTGGATGA AGGAAGTGAGGATGAGGGAGAG |
| GenBank Accession | BX002669 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:29468124 - go to primer design |
| BLAST e Value | 1e-10 |
| Hit Clone Code (BAC ID) | F3F9 |
| Hit Gene Code | At1g78320 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | glutathione S-transferase TAU 23 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g48040
| Sequence (A. th genome BLAST matches underlined) | >66-K017045-022-366-B09-8409 NGATCATGAGATTTCCCGGACATGAAGCCATTNATCCTGACCTGTCCTGACACAAACCCG ATTTTCCAATAAGGATCCTTACCAGAGAGCTCAAGCTAGGGGAACCATCCTTAATATGGT AACAACTGAGTCAAACTCAATGGTATAATTATTGTTACTTACAAATCGGAAAACCAAAAA AAAAAAAAAGGGCCCAAAAAAAAAAGGGGTTTTTAAAAAGGGGGGGAAAAACCCCCCGGC GGAAAGGGGAAATTGGGAAAAAGCCCCCTTTCCCCGCGGGATTTAAAAAGGGGGGGGGCA AAAAAAAAAAAATGGGGGGGGGCCCTGGGGGCCCCCCCCCAAAAGGGGGGGGTAAAAAAA |
| GenBank Accession | BX002670 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:19472354 - go to primer design |
| BLAST e Value | 3e-20 |
| Hit Clone Code (BAC ID) | MDN11 |
| Hit Gene Code | At5g48040 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Ubiquitin carboxyl-terminal hydrolase family protein |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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