SimpleSearch - Line and FST details


Line specific information

 
Line ID 368F01
Vector Used pAC161
Line Availability available as T3 set from NASC (N435293)
Segregation Analysis 50:48:44
Confirmed for Hit At1g04920
Parent of DUPLO pair none
Parent of pair(s) 3250, 3341, 60730

Gene hit At1g04920

 
Sequence (A. th genome BLAST matches underlined) 
>06-K017042-022-368-F01-8409
TATCCTGTGATTTCCCGGACTGAAGCCTTTACATTGAATATGCGATGAGCAATTCAATAT
GATCATATGTGGTGAGGCAAGAAACAAGGGCTCTCCAAGTCTTATTCAAGAGGATCAGGC
ATCTATGGGATCTCCCCTATAGTGAGAAAGCTATCCCTCTTCCCCTCCTTATTTATTCCC
TTCGCTCCCGCTGCCCCGTTTTAATGAGTCTCCCTCACTCGCTTGAATCTTGTCAGCCTT
CCTCACCCTATTTAGTTCATCTCTCGCCCTTTTATCTTAACTCTCATCATCCACCCTTTA
GCCATCTGTGGATCCGATCCCACGGCTTTGATGATATTCTCACTCATCGGAACCATTGCT
TTCTCATCCGGATCTCCCTCATTGTCATAGCAATCAACCGCTAAAACCACCACCCGTTCC
CCTCGCCTCAAAACCGGATACTTGCTACCCAAGTTATCACTTTGTTTCTTCCCCTGTAAT
TCTGGTTTACTCTTGATTTCAGGTGTCCTCATCCCGCTCATGATTTGTTTAACCGGATCA
GCAGAATTCGGTTCAAGAGACCCCTTCACCCATGGTTTATCTCCATCCCTAAAGAGCCTC
AAGACCTGTCTTTAAACCTCTTTAAGAGAGTCGTTGAATGAAAATTCATCCGCCTTGAAC
ACCCCCTTCCTCCGCATCTGTCTGCCCCTGCGGATTTCTCAT
GenBank Accession BX002991 [GenBank]
Graphic View Graphic view of gene At1g04920
Predicted Position of Insertion Chr1:1392367 - go to primer design
BLAST e Value 4e-161
Hit Clone Code (BAC ID) F13M7
Hit Gene Code At1g04920 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation sucrose phosphate synthase 3F
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX002991 [GenBank]


Last Updated on 10.06.2021 13:37