SimpleSearch - Line and FST details


Line specific information

 
Line ID 368G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N435310)
Segregation Analysis 50:30:29
Confirmed for Hit At5g39430
Parent of DUPLO pair 2762
Parent of pair(s) none

Gene hit At5g39430

 
Sequence (A. th genome BLAST matches underlined) 
>47-K017047-022-368-G06-8409
TGATCTGTNATTTCCCGGACTGAAGCCATTTACATTGAATATATTCGTGGATGAACCTAA
TAGATAGGAGGTCTATTAAAATACTCTGTAATCTCCAGATGAGTCGTTAGGCTTTATTCT
TATCGACGCTTGGGAGGTGCATGTCTACTCATGGATCCCCTCGGCAATGGATCGTGTTAT
TCGCAATGATGACTCCTGTCTTTCCACCCTATCCTATGATTGCCTGTCGACAGATCAGAC
TTCCAGAAAAATCCCTTGGCTCCACTGCGTGTCTCTATGAATTCCTCCGTAAGATGATGT
TGGAGAAGTGGCGATTGCTGTATCTTCACCTACAACAGCGCTAAGATCGCAGGCCCACTT
TATTCTCCATTGTTCTCACATATTAGACAAAGGATACCACTATGGGATCTCCCCAATACC
GAGACAGCATCAAGGTTAACCATCAAAGACCTAAAGACCGTTTCATTTTTTTTAGACCAT
TTTTTGTGAATGCGCGCATTGATCGTTATAGATGGTTTGTTACAGAAACTATGGGAT
GenBank Accession BX003015 [GenBank]
Graphic View Graphic view of gene At5g39430
Predicted Position of Insertion Chr5:15776397 - go to primer design
BLAST e Value 4e-41
Hit Clone Code (BAC ID) MUL8
Hit Gene Code At5g39430 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation DUF1336 family protein, putative (DUF1336)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR808952 [GenBank] BX003015 [GenBank]


Last Updated on 10.06.2021 13:37