SimpleSearch - Line and FST details


Line specific information

 
Line ID 369A05
Vector Used pAC161
Line Availability available as T3 set from NASC (N435333)
Segregation Analysis 50:33:22
Confirmed for Hit At4g31760
Parent of DUPLO pair 4146
Parent of pair(s) none

Gene hit F24B18

 
Sequence (A. th genome BLAST matches underlined) 
>33-K017093-022-369-A05-8409
TATCATGAAATTTCCCGGAATGAAGCATTTACATTGAATATATCCTTCAATTGAAACTTC
GTTGTGGTAGACAGAATATTCCACTTGGTCTGCCCCTTCTATTGCATGCCTTTATTTTTT
ATTATTACTCTCCAAAACAATCCAACCAAATCTCTTCCTCATTGGATAATTAATCACTAT
CATTATCCATAACGTATTCAATAATGGTTTATTTTAAATGAATGCATGATCCCAACCGCA
AAATGAACAGAATTCGTCGAAAGAACATTGAATCTTGATTTATTGACATGGTCATTCATC
GATTTTAATTAAGTATATCTCTACCTATGGGATCTCCCTAAATAGTGAG
GenBank Accession BX003051 [GenBank]
Graphic View Graphic view of sequence BX003051 of line 369A05
Predicted Position of Insertion Chr5:22120760 - go to primer design
BLAST e Value 1e-155
Hit Clone Code (BAC ID) F24B18
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At4g31760

 
Sequence (A. th genome BLAST matches underlined) 
>33-K017072-022-369-A05-8409
AATATTTTGGCTTTAAAACTTTCAATTTCGGAGAATTTCCATCAGAGAAAATTAACAATA
ACCAAAAAAAAGTAGTAACTGAAAAAAAAATTTAAGCAGGAAGATTCCCGAAAAAAACGA
ACCTGGTTCAAAGAGGGAAACAATCCCAGTGAAGGGGTTTCTTTGGGATCTCCCTCTATA
GGGAGAGNNGANANGANNANGNNNTTTTCATTTTTTTTTCCTTTCNAATATGAGGAGTCC
TCATTTTATTTAAAGTAAAATCTGTGTCGATGATGTTCGGTCTCACGTTTGCAGCCATCG
ATTCTTTCCCGTCTCTCCTCCCTGTCGGAATCTCAACCACCGGTCCTCCTGCCTGTCCCG
CCAAAGAAGAAAAACATTCAAACCTTAATAAGGATAACCGGATTAATGTATCTACAACTC
CGGTTATATTTGGTTCATTGTGTAGTCTATGCGAAAATGATACAGAATTGGTTTGTTTCT
TTTTTTCCATTTCATGTGTATGCTTTCGGTTCAGTTGGGATTGGTTAAACCGGATTACAG
CAATATATATTGAAGTGAAGTGGGAGTGAAGTAAATGTTACAGCTTCAACGGGGTCTCTA
GenBank Accession BX003050 [GenBank]
Graphic View Graphic view of gene At4g31760
Predicted Position of Insertion Chr4:15368704 - go to primer design
BLAST e Value 5e-170
Hit Clone Code (BAC ID) F28M20
Hit Gene Code At4g31760 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation peroxidase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37