SimpleSearch - Line and FST details


Line specific information

 
Line ID 369E06
Vector Used pAC161
Line Availability available as T3 set from NASC (N435382)
Segregation Analysis 50:49:45
Confirmed for Hit At4g30290
Parent of DUPLO pair none
Parent of pair(s) 6626, 6649, 7861, 10707, 11062, 82733, 82745, 82746, 82747, 82748, 82752, 82753, 82754, 82755, 82756, 82758, 82759, 82761
Note

Gene hit At4g30290

 
Sequence (A. th genome BLAST matches underlined) 
>45-K017093-022-369-E06-8409
TGATCTGAAATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGAAAATCTGTT
TCCGCTTATCCATAGATATAACTCTTGTATTATATGGTAAATCGGCTCCATCACGATTTG
TCAATGCAACAGAGATAGAAGTGTTCCCTTGATTATCGTGAATGCTTTCCACGACATTCT
CCCCAATAGTATGTTATCGGCTTTGTGGAAGCTGCCTGCATATACGCTGATAGATTGTGC
TGCCCAGAGAAAGAGAATCAAGAACGTAAAAGACTTCTTTTTTATTAGATCTCCCTATGG
GATCCTCCNTATAGTGAGAGGGACCCCCCCTTATAGGGGGANNNGTTTNTTTACTTTNAT
GTTTTTATTTGAATTTGAAAACATTGAGATAAGAGGGATGGAAACATGAATATATTTAGA
TGGAGCTATGATGCATTTGGACCACTTACGAGTAAGAGATTGTCCCGCTTCGCTCCGAAA
GTGAGAGGCTGCCG
GenBank Accession BX003123 [GenBank]
Graphic View Graphic view of gene At4g30290
Predicted Position of Insertion Chr4:14829748 - go to primer design
BLAST e Value 7e-49
Hit Clone Code (BAC ID) F17I23
Hit Gene Code At4g30290 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation xyloglucan endotransglucosylase/hydrolase 19
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g38430

 
Sequence (A. th genome BLAST matches underlined) 
>45-K017072-022-369-E06-8409
TGATCTGAAATTTCCCGGACATGAAGCCTTTACATTGAATATATCCTGATGTATCCATGT
AGGTTATCCTCTATTTTATAAACTGTCACGATCGATGCCTTGATTTCGCCATTCCCAGAT
ACCCATTTCATCTTCAGATTGGTCTGAGATTATGCGAATATATACACTCATATACATAAA
TACTGACAGTTTGAGCTACCAATTCAGTGTAGCCCATTACCTTACATAATTGCACTCAAA
TGCTATGGGATCCTCCCCCTATAGTGAGATCCTTTTTATTAGATCTCTCTATGGGATCCT
CCCCTATAGAGAGAAGCGGCCGCGGTGGCTCCATTCGGCGGCCTCAAATCCATGACTGGA
TTCCCAGCTAAGAAGGTCAACACTGACATTACTTCCATTACAAGCAATGGTGGAAGAGTA
AAGTGCATGGTGACGGCGTTCGGCATTCTGAATCTCACCGAGGACTCCTTCTTCGATGAG
AGCCGGCGGATATGGGATCCTCCCTATAGTGAG
GenBank Accession FR808963 [GenBank]
Graphic View Graphic view of gene At5g38430
Predicted Position of Insertion Chr5:15385358 - go to primer design
BLAST e Value 6e-06
Hit Clone Code (BAC ID) MXI10
Hit Gene Code At5g38430 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribulose bisphosphate carboxylase (small chain) family protein
Insertion Classification Promoter
Confirmation Status failed, line belongs to a contamination group, please check line 950G06


Last Updated on 10.06.2021 13:37