SimpleSearch - Line and FST details


Line specific information

 
Line ID 369F05
Vector Used pAC161
Line Availability available as T3 set from NASC (N435393)
Segregation Analysis 50:50:49
Confirmed for Hit At3g60970
Parent of DUPLO pair none
Parent of pair(s) 3608, 3683, 42779, 84543, 84545, 84546, 91547, 91548

Gene hit At2g04500

 
Sequence (A. th genome BLAST matches underlined) 
>38-K017072-022-369-F05-8409
TATCCTGTGATTTCCCGGACATGAGCATTTACAATTGATATATCATATTGAATTTGGACT
TGTGATGATTGTGGGGTCAGCCTTCATTTAAAGTGTGTACTTGGAGATTTATATAATGCG
AAGCTATGGGATCTNCCTTATAGTGAG
GenBank Accession BX003137 [GenBank]
Graphic View Graphic view of gene At2g04500
Predicted Position of Insertion Chr2:1569707 - go to primer design
BLAST e Value 5e-31
Hit Clone Code (BAC ID) T1O3
Hit Gene Code At2g04500 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cysteine/Histidine-rich C1 domain family protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At3g60970

 
Sequence (A. th genome BLAST matches underlined) 
>38-K017093-022-369-F05-8409
TTTCCCGGACTGAAACATCAGATTGGCCGTTTCCCGAAAATCGGACTTTGTAACATTTGA
AACGTTGCAAGAGCAGATAAGACTGCTCCAGCTGTTAGCTTCACTCCCATTAACATACAA
GTAACAAAAGTCACCACAGAGATCAATGAAGGAGCTCCCCAAAGTATGAAAGTTGTGAAA
TCTTGTAACCTCAAAGACTTCCATAAACAATCATACTCTTTCTTTCTTAATGTTTTAACC
TTGTTGAGAAACTGGTTATCCCATGCTTGAAGCTTCAGAATCTTCATGTTTTTAAGAATC
TCTGAAGTTGCTTTCATTCTATCATCTTTGGCATTCATGATATCTGATTGGTAGTTTCTC
TGAAGCCTTGTCAATGGGTAGTTGCAAGCCATCACCATTAAAGTTGTGACCAATGCAGCT
AAAGCTCCAAGTCCCAGATGTTTTTGCAAGATATAAATCGCTGAGAAAATCTGTATAGGT
AACATCCATATGCTGTTTACATACCAAATGAAGTCAGTGATTCTCTGAACATCTACGCTC
ATGTAGTTGATGATCTCTCCGCTCGTGTGGCTTTGCCGAGATTGACTTAATAAAAGTAAA
CCTTTCTGGTATATATGCGATATCAAAGCTGCTCGAAGACGTAGTCCTA
GenBank Accession BX003138 [GenBank]
Graphic View Graphic view of gene At3g60970
Predicted Position of Insertion Chr3:22558043 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T27I15
Hit Gene Code At3g60970 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation multidrug resistance-associated protein 15
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37