SimpleSearch - Line and FST details


Line specific information

 
Line ID 370E09
Vector Used pAC161
Line Availability available as T3 set from NASC (N435481)
Segregation Analysis 50:48:31
Confirmed for Hit At1g06360
Parent of DUPLO pair none
Parent of pair(s) 83544, 83548, 83553, 83555, 83560, 83561

Gene hit At4g22140

 
Sequence (A. th genome BLAST matches underlined) 
>69-K017073-022-370-E09-8409
GATCCATTGAATATGGCTAGTGCACCTGGATTAGAGCCATGCCCTTATTTGACTCCCAAG
ACCGGATACATAGCTCTTCTGAGCGGGTCAAATTCAAATACAATGAGTGCTTAGGGAAAG
TAAGAAAGAAAGACATAAAGCGGAATCCGGTAATCCTACTGCTACTAAGACTACTCCGTC
TTAGGGCTATGGGATCCTCCCCCTATAGTGAGAAAATTAAGACGGGAAGGAAGGAGCTGG
ACTCTTATACCATCAAGGGCACCAACAAAGTTGTGAGAGGTAGTGCTTATATTATCATTT
GTTATCGTCACTTGACAAATTTAGACATTTCTCTGCATGATTTTGGGCATTTGAGTGTTG
AGTAATGGTTTATAAAGGAAGGGATTGCTTGAAAGCTTGGTTATGGAGTCAATGTCTGCT
TAGGTCTTTTAGATTCACTCTTGTTTTTGGTCTTTTTGTTCTGGTGTTGTGTAGCTATGG
GATC
GenBank Accession BX003255 [GenBank]
Graphic View Graphic view of gene At4g22140
Predicted Position of Insertion Chr4:11730398 - go to primer design
BLAST e Value 1e-145
Hit Clone Code (BAC ID) T10I14
Hit Gene Code At4g22140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At1g06360

 
Sequence (A. th genome BLAST matches underlined) 
>69-K017094-022-370-E09-8409
CCCTTGCCATTCGGAGAAACCAATAGAACCATTGCTGCTTCAAGTCCATCACGTTGTTAC
GTCCTCCACACTGTTACATGCATATTATTACAACATCGTATATATAGGTTATATACAAGA
AGACAACATTTCTTCGCTACATTACCTTATATTTGATATAACGAGTGTCACATATCCACC
ACACATGACTGAACCAAAATCCTTCGATAGGGCTATGTGGGTCACGGTCAGAATCTGTGA
ACTGGTGATGGAACCTATGTATGCTCACCCAATCCATGAACTGCAAGTGAAACCCAGAGA
TAGATATCTTCAGGTTTAATTGATCCAATTGCTCCATACCTAAGCTTGAGACTCAAGCTT
TCAATGGCCGGAGCTTTATGTCCTATGGGAT
GenBank Accession BX003256 [GenBank]
Graphic View Graphic view of gene At1g06360
Predicted Position of Insertion Chr1:1939586 - go to primer design
BLAST e Value 6e-148
Hit Clone Code (BAC ID) T2D23
Hit Gene Code At1g06360 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Fatty acid desaturase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37