SimpleSearch - Line and FST details


Line specific information

 
Line ID 370G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N435502)
Segregation Analysis 50:40:25
Confirmed for Hit At2g39280
Parent of DUPLO pair 11677
Parent of pair(s) none

Gene hit At2g39280

 
Sequence (A. th genome BLAST matches underlined) 
>47-K017073-022-370-G06-8409
TATCATGAGATTTCCCGGACATGAAGCCTTTACATTAATCGGACACGCACGCCGAACGCG
GTTACCTATATATATAAGGACTCTTTGCGTATTGCAAAATCTGGAACGCATTCGTATATG
GCAACGTCACTACCGCTTTTGATATCTTTCACACAACTGTAGCAAAACTACTGTGCTGGA
TCACCCAATTTTAGCATAACCTGTCATTTTTTCCTATCAATGCCAAAGTACACTCGATCA
TGTATAAGACTCTCNCGAGAACAAAATAAGAGTTATGGATATACAAAGAACCTTGTACAT
TTAACATATTCTCGGTATCTTTGCACATGCTGAGGCCTCACAGAAAATCCATATGCATCC
CTGTTCATAAAACCAACCTCATTAACTTCCCTAAGTACTAAGAATATAGATGAAATCAAG
ATCAATGATCGCTATGGGATCTCCCNTATCAGTGAGAGACTTCTA
GenBank Accession BX003284 [GenBank]
Graphic View Graphic view of gene At2g39280
Predicted Position of Insertion Chr2:16406150 - go to primer design
BLAST e Value 6e-86
Hit Clone Code (BAC ID) T16B24
Hit Gene Code At2g39280 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ypt/Rab-GAP domain of gyp1p superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX003284 [GenBank]


Last Updated on 10.06.2021 13:37