SimpleSearch - Line and FST details


Line specific information

 
Line ID 371C10
Vector Used pAC161
Line Availability available as T3 set from NASC (N435554)
Segregation Analysis 100:97:76
Confirmed for Hit At3g18570
Parent of DUPLO pair none
Parent of pair(s) 11918

Gene hit F19O5

 
Sequence (A. th genome BLAST matches underlined) 
>75-K017095-022-371-C10-8409
GATCTGTAGATTTCCCGGACTGAAGCCATTTACATTGAATATATCCGCCTTCTTGGTGAT
TGCTCACCGCTGGCGTGTTTTGCTTTTGCGGCTATGACAAAATGTAGACCCATCATACAT
TACAAATGAGCCTGAAGGTGTCCAAACGGTTGCTGCATTCATTACCTAAGGGCTTATTGC
ATGAATCTGTGCCACTTGAGCTTTAAACAAGTCATCGAACACATTTAGGTCAGCTCCATG
CTTTGTCTCCTTTGACCGCTGATCAATAAAATATAAGCGGTTAACACATCATAATCCGGA
GAGGATCCCATCAACCTGCACTTTTCCTATCCAACGCACTGATAATACCACACTACTCGA
ACCCATCCTCAGAAACCTCTTCTCTACTCCTACATAATAACATTATTTCGTGGCGTAGAA
CAAATTAGACCATGATAACTTTATGGTAGCAACCTGATTAACACAGACTGCCAACTACTT
TATCACCTGACTTAACATACACTGAATACTGAATACTGAACACATATTGAGACTGGCGGA
TAACTTAAGCCTCCCTTATCCTCACCCCCACCTCAGATCAATAACTCGACCTCTACCACC
TATGGGCAATTTTAAACAAGTTTCTTTTGAAGCCGATACCTGAATGCCAAGTATAGCTCG
TAAAAACCTATCTTCCGGAGCATAAGAAGATTCTTTCCCCACTTGAGGGGTTAATTTACC
TACTAAAATATCACCTGTTTCAACCCACGATCCTA
GenBank Accession FR808999 [GenBank]
Graphic View Graphic view of sequence FR808999 of line 371C10
Predicted Position of Insertion Chr4:3353541 - go to primer design
BLAST e Value 1e-07
Hit Clone Code (BAC ID) F19O5
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At3g18570

 
Sequence (A. th genome BLAST matches underlined) 
>75-K017074-022-371-C10-8409
TGATCCTGAAATTTCCCGGACATGAAGCCTTTACACACAATAATATTGTATGTGTTACGT
GTCTTATCAGCGATTCCATCATTCTGATGTGACTGACTATACTAACATCCCAACTGTGTG
ATGTACAAAGCTCCAGTCACGTGATAGTATTCTTCCACTACCCTATCATTATGAAATCTC
GATGATCCTCGACAATCCTCTCCAACTTGTGTTATGCCACCACATTCCATGTAGTTTTAT
AAGATTCAAACATCACATTATTTTGTAGCTATGGGATCCTCCCCTGATCTATAAAACGGT
ATCTCACGTCAAAGATTACGCTATGGGATCCTTCNTATAGTGAGAACTATGGCTATGCGA
TCATCCCTATAGTGAG
GenBank Accession BX003354 [GenBank]
Graphic View Graphic view of gene At3g18570
Predicted Position of Insertion Chr3:6396392 - go to primer design
BLAST e Value 3e-05
Hit Clone Code (BAC ID) K24M9
Hit Gene Code At3g18570 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Oleosin family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37