SimpleSearch - Line and FST details


Line specific information

 
Line ID 371H06
Vector Used pAC161
Line Availability available as T3 set from NASC (N435610)
Segregation Analysis 50:42:42
Confirmed for Hit At5g28540
Parent of DUPLO pair none
Parent of pair(s) 94874, 94885, 94893, 94894, 94895, 94897, 94898, 94900, 94901, 94902

Gene hit At5g28540

 
Sequence (A. th genome BLAST matches underlined) 
>48-K017095-022-371-H06-8409
TGATCTGTNATTTCCCGGACATGAAGCCTTTACATTTCGCTATATCTTGACGCCATATCT
CCTCTCGACCTATTTATAATTATCCTGATCTCGTTTGGACCTAGGACCCCCTCAAGTCGA
TGTCCCCTTCGAAGAGGACGCCTCCGCATTCTTATTGCGTACTCTGAGGACAAGGCGAGT
GGTGACTCGAAGAAGATTACTATCTCAAACCCGAAGGGTCCTCTGATCCAAGAACATATT
GTCCGTATGGCGAAAGAGGCCGAGGAGGTTGCCGAGGAAGACTAGAAGGTCATGGAGAAG
ATCGACTCCTTGAATGCCCTGCAGACATACGCGTACTACATGACGAACCCCGTGAACGAC
AAGGACAATCTTGCCGACAAATTGGAAGGAGATGAAAAGGAGAAGATCGAAGCAGCGACG
AAAGAGGCTTTGGAGTGGCTCGACGAAAACCAAAACTCAGAGAAAGAAGAGTACGACGAG
AAGCTCAAGGAGGTAGAGGCAGTGTGTAACCCAATCATCACAGCAGTTTACCAGAGATCT
GGCGGAGCACCAGGTGGTGCAGGAGGAGAATCATCGACTGAGGAGGAAGATGAGTCTCAC
GATGAGCCCTATG
GenBank Accession BX003422 [GenBank]
Graphic View Graphic view of gene At5g28540
Predicted Position of Insertion Chr5:10541219 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T26D3
Hit Gene Code At5g28540 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation heat shock protein 70 (Hsp 70) family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX003421 [GenBank]


Last Updated on 10.06.2021 13:37