SimpleSearch - Line and FST details


Line specific information

 
Line ID 372A02
Vector Used pAC161
Line Availability available as T3 set from NASC (N435618)
Segregation Analysis 50:47:44
Confirmed for Hit At3g22890
Parent of DUPLO pair none
Parent of pair(s) 1204, 8231, 8271

Gene hit At3g50280

 
Sequence (A. th genome BLAST matches underlined) 
>09-K017075-022-372-A02-8409
TGATCTGAAATTTCCCGGACTGAAGCCTTTACATTGAATATATCCTGATAATGGCCCATT
TTATGTTTCTGATTTGAAGTCGCCCGATGAGTGAGATGATGTATTTTCTTTTGGTCGCTG
AACTCAAAGATGTGTCTCTCCTAAAGCTTACTTATCGCAGATATGCTTAGCTTCAGCTCT
ATACGCTTTATTTGAGCTTGGGGATCAATAGAATACTTTTCGAAGAGAAAATATACAGTC
ACTCCAAGCCCAAGACTATGTCCTTGCTATCATTTTTATTTCCCAACTGAAACAATCATG
CAATAATTACATGCTCTAAAAATTCCAAATCAGCTATGGGATCCTCCCCTATAGAGAGAN
AAATTATAATCTTCCTTAAACTTGAAAATGTGTTTCAATTTTACATAGTACGGGAAAATG
TAAATGAGAAATTACATGTTCGCTTTTGCTATGGG
GenBank Accession BX003431 [GenBank]
Graphic View Graphic view of gene At3g50280
Predicted Position of Insertion Chr3:18637526 - go to primer design
BLAST e Value 5e-111
Hit Clone Code (BAC ID) F11C1
Hit Gene Code At3g50280 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation HXXXD-type acyl-transferase family protein
Insertion Classification Promoter
Confirmation Status unknown

Gene hit At3g22890

 
Sequence (A. th genome BLAST matches underlined) 
>09-K017096-022-372-A02-8409
TGATCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATGATGGCTCAGCTCAACAC
GTGGCAAATCCACTCGGAGGTTTAAACTAGGGGATACTCGTGATAGTGAAGATTCTGCAA
TAGAACCTGCGATGATCTGACAACAGTAGCTTCGTTATGATGTGCTGGCCAATCGCTCTC
TCCATATGAGATATGCAAGTAGCGCAGAATGATCAATTCTGCCTCGAACGCGCTTTTCAC
GAACAATGGGAATCCCATCCCTTAGGAGACCTCTTAGTACCTTCTTCAACATAATCTTTG
GGATATTCCGATCATGATAGAGTTGGAGAACACGATATCTGTGATGGGAATCTGTTTATA
AACTGATCTCTCGTTGAGATTAGTAAAATACAGTATCGTCTCGATAACATCGTACTCGAT
AAATTAATAACTATGTATTCTCCATTAGACTTAGACTA
GenBank Accession BX003432 [GenBank]
Graphic View Graphic view of gene At3g22890
Predicted Position of Insertion Chr3:8113121 - go to primer design
BLAST e Value 5e-22
Hit Clone Code (BAC ID) F5N5
Hit Gene Code At3g22890 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ATP sulfurylase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37