SimpleSearch - Line and FST details


Line specific information

 
Line ID 373A07
Vector Used pAC161
Line Availability available as T3 set from NASC (N435719)
Segregation Analysis 50:43:31
Confirmed for Hit At1g61140 At1g60730
Parent of DUPLO pair none
Parent of pair(s) 68285, 97012, 97013, 97014, 97015

Gene hit At1g61140

 
Sequence (A. th genome BLAST matches underlined) 
>49-K017165-022-373-A07-8409
GCATTTGAGAATTGAGATCCATGCCCCTCGGCTAGAATATATTCCCGGTCTCCTGGTTGA
ATTTGAAAGTCTCTATATTTACTTGACTTGAGTGAGTGAGCTGGGATCTTCTACGACATA
TTGCAAACATGTATCTGAATCGTAAAAATGATTGGAGCTTATCTTGCCACTGGCTTGGCT
ATGGGATCCTCGCTATAGTGAG
GenBank Accession BX003567 [GenBank]
Graphic View Graphic view of gene At1g61140
Predicted Position of Insertion Chr1:22538774 - go to primer design
BLAST e Value 1e-50
Hit Clone Code (BAC ID) F11P17
Hit Gene Code At1g61140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g60730

 
Sequence (A. th genome BLAST matches underlined) 
>49-K017159-022-373-A07-8409
TTTACCTTGATACCGGGTATATATTATCCTTCTCACTCCTGCAAGCTTCCGCCATGAGTC
TCTGTCAGAAGTCAGAACTATCTCTCTCTCTTGACTTGCCTATGGGATCTCCCCTATAGT
GAGAANTATTGCAAACGTGTATCTCAATCTTATTTATGATTGGAGCTTATCTTGCCACTG
TCTTG
GenBank Accession BX003566 [GenBank]
Graphic View Graphic view of gene At1g60730
Predicted Position of Insertion Chr1:22360054 - go to primer design
BLAST e Value 1e-28
Hit Clone Code (BAC ID) F8A5
Hit Gene Code At1g60730 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NAD(P)-linked oxidoreductase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37