SimpleSearch - Line and FST details
Line specific information
| Line ID | 373G02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N435786) |
| Segregation Analysis | 50:49:39 |
| Confirmed for Hit | At1g24070 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3644, 3741, 5019, 5216, 9790, 10251, 86368, 86380, 86383, 86385, 89398, 89399, 89400 |
Gene hit At1g09910
| Sequence (A. th genome BLAST matches underlined) | >15-K017159-022-373-G02-8409 TTTCCCGGACTGTTCCACGCAACTTGAACCGGAGCCTGATTACCTCCACACTCTGTCCCC TTCCTCGTTCTAACCCCGAGGTCGCTCTGGTTCAAGCCCGATGGAGATTCAGTACGTACA TTATGGTAGACAATTTTACGTACCTAAACATTTACAACTATTAGCTTATATGAGACTATC AATATTTGTAAATTTTTACTCCATACCTATGGGATCCTCGCCTATAGTGAGAGACCTGTT CTACAGATCCTATATCTATGACCATTTCAAAACTCTTGTTTTACACAAGCACTTATGAAA CTTTGAGTATCTCGTGCTGCTGCATTCTGCGATAAAGAGGAGTTCTCATATTAATCCCTT TAGGTTTTCTACATTCAAAAGTGTGTGATTTTTTTCCGTACACTAATATCAGGCTCAGAG GGGACAGATCAAGGTACAAGTGGTCTTACTCATAGGAAGGATCACAGGATGTCCTCTCAT GGAGTCCACCTGCATGTCCATGATCGATATGTAATGCAACGTCCTCAGTCGACAATGTGC CCTTTCATGTGTCTTTTATTGAATGTGTTTTGACTATAGACGGCAATGGTGCATGTTGTG ATGGACAATGCGATCCTACCAGTTACACTGTCAAAGCCAGGTGGAATTTATCACTGGCAT AGAGTATAACGGTATTGAACATGTGCTCGAAGTTCGTCACCAGGAGACTAACAGAAGGGT ATGAATCATGGTTTACTATATGATTTTAGTTATACTGCTTTCTTCCGAGGAGAACAAAAG TCTTTTTTTCCTTCAATTCTGGGAAAAAGCCAAGTTATCGATAATAAAATGAATGGATGG GACTGGGGACTGCACTGGAATGAACCTGGGAGGCAGGGGATATTTGATTGTATGCCTCTA TGCATT |
| GenBank Accession | BX003639 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:3224193 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F21M12 |
| Hit Gene Code | At1g09910 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Rhamnogalacturonate lyase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
Gene hit At1g24070
| Sequence (A. th genome BLAST matches underlined) | >15-K017165-022-373-G02-8409 GTAGATTCCCGGACTCTTCGACGCAACTTCCAACCGGAGCCTGATTACCTCCAACACTCT GTCCCCTTCCTCGTTCATAACCCCGAGGACGCTCTGGTTCAAGCCCGATGGAGATTCAGT ACGTACATGATGGCAGACAATTTTACGTACCTAAACATTTACAACTATTAACTTATATGA GACTATCAATATTTGTAAATTTTTACTCCATATCTATGGGATCCTCCNCTATAGTGAGAA GACGCTCCGCGGGTGTGGGGGCCTCTTTGTGACACCTGTGTCGAGAGGGGTCTCCACCGA TATGCTCTTTTCTATCTCACTGAGGGGATATGTGTGAGACACCTCCCCCTTCCACTATAT TTTTTTTTTATTGACACACACCTCTGCGCTGTGATCTCAGAAGGTGTCTGGAGATAACCC TCTGTGG |
| GenBank Accession | BX003640 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr1:8518733 - go to primer design |
| BLAST e Value | 5e-99 |
| Hit Clone Code (BAC ID) | T23E23 |
| Hit Gene Code | At1g24070 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | cellulose synthase-like A10 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
