SimpleSearch - Line and FST details


Line specific information

 
Line ID 374E12
Vector Used pAC161
Line Availability available as T3 set from NASC (N435868)
Segregation Analysis 50:46:32
Confirmed for Hit At4g20450
Parent of DUPLO pair none
Parent of pair(s) 6697, 6701, 6703, 6705, 6730, 72965, 73000, 73029, 73058, 73089, 73118, 73144, 73172, 73225, 73317, 73338, 73357, 73419, 73468, 73482, 73495, 73507, 73518, 73528, 73539, 73549, 73557, 73572, 73578, 73582, 73586, 73589, 73591, 73592

Gene hit At4g20450

 
Sequence (A. th genome BLAST matches underlined) 
>93-K017160-022-374-E12-8409
TGATCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATTACCGCATTTACTCGGGTAT
AAATGGCTTACTCCAGCTTCTTCAGACCGAAACAGATGAAAACGACGGTTTGTCAACTGT
ACTTAATTACTATGTAGATATACGAACCCTTTTTGGTTGTTCATGAGGTTAAACTATTCA
ACAACATATAAACTTTATATTCCCAGTCACTACATTGAAGAACATTCAAGCCACTTATAG
AATACAAAAAACGAACTGGCAAGGAGATCCATGTGTACCTATACAGTTTATATGGACTGG
CCTAAACTGTAGCAACATGTTTCCGTCTATTCCACCAAGAATCACTTCCATGTAAGATCA
TTACACTACTCAAGTTTTCTTGTTTAAATCAATTCTTTTTTTCTTTCTTTTTAATGGAAA
TTTAACTGTGCCCTGGTCTATATGCAGAGACTTTTCTAACTTTGGATTAAATGGGACCAT
AACAAGTGATATACAATATCTTAACCAGCTACAGAAATTGTAAGTCTCATATACATATCT
CCCTATATAATTATAGAGGGAACATCTATTTGACTATTTTGATATCTTTGTTTGACAATC
ATGATTTATTTATGTTATAGGGACCTGTCAAATAACAACTTGACGGGAAAGGTGCCTGAA
TTTCTCGCCAAAATGAAGTTGTTGACATTCATGTAAGTTCCCCTATG
GenBank Accession BX003749 [GenBank]
Graphic View Graphic view of gene At4g20450
Predicted Position of Insertion Chr4:11026460 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F9F13
Hit Gene Code At4g20450 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37