SimpleSearch - Line and FST details


Line specific information

 
Line ID 376B06
Vector Used pAC161
Line Availability available as T3 set from NASC (N436018)
Segregation Analysis 50:50:36
Confirmed for Hit At1g11080
Parent of DUPLO pair none
Parent of pair(s) 6215, 6230, 6233, 6243, 73745, 73813, 73841, 73869

Gene hit At1g11080

 
Sequence (A. th genome BLAST matches underlined) 
>42-K017168-022-376-B06-8409
TGATCTGAAATTTCCCGGACATGAAGCCATTTACAATTGAATATATCCTGACTATCAGTG
TATGCAAAACCGACGGGTTTGAACCAGTCCAATTATTAAAGATCTCCATGCTGAAGTTAG
AATACCAAAGAACATTCGGACAAATTCCTGTCAAATATTACACAAAAAAAAAACCGTAAG
GGATATGGGGAAGAGAACTTGCAAAGGCTCCAGTCCTTGGAATAAACTCCATCACTCCCT
TGAAAAAACTTCTGAACCTCTGCTCGGTTGTAAAATACTCTCGGGCAATCATCTAAACAT
GAACCATATCCACCCATAAGCCTCGGGGGCATTTAAGGCTTCCCAACAAAATAAAAGATG
ATTTGTGAATTTCACAGATAAATTATAGGCTTTTATGTTATACACATGCACATACCCTCT
TGGAGCTAATGCAAAAATTTGTTTTGAATTGCGCTGAATCAAAGTAAAACAATCGCGCAA
AATCTCCTATGCAAACTGAGGAATAAATGCTATAAATATCTATCTCGGGATACTGCTTGA
AAACTTCGGCTACGGCCTCATTGCACTCATCGTTGCTCCAAGAATTATCGCTGCTGAAAT
TGCACGTCCGGGTTATGATCCTATGAGTCTCATCTGATATTACTGCATGGCTCCATGCAT
AATCCACCCAACCTCTCCAATCTTCTGCATCTGATGTCTCAGGATTCCCCAACTATGTAG
C
GenBank Accession BX003954 [GenBank]
Graphic View Graphic view of gene At1g11080
Predicted Position of Insertion Chr1:3695565 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T19D16
Hit Gene Code At1g11080 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation serine carboxypeptidase-like 31
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37