SimpleSearch - Line and FST details


Line specific information

 
Line ID 376C09
Vector Used pAC161
Line Availability available as T3 set from NASC (N436033)
Segregation Analysis 100:83:75
Confirmed for Hit At1g55290
Parent of DUPLO pair none
Parent of pair(s) 3640, 3664, 7094

Gene hit At1g55290

 
Sequence (A. th genome BLAST matches underlined) 
>67-K017162-022-376-C09-8409
TTTCATCTAAAGAGTTCTTCGTACTAAAAAGATTCTNTGCTAATATGTTTACCCCGAAAG
AAACTGAGAGCTTAAGGTTAAATTNTCGGTTTGTCTTCGATGATTTGTGGTTTCTCCTGT
TATTCACTATGGGATCCTCTCCTATAGTCGAGACNNNNNNNNAACNACCGCTTCCTCCTC
CTTTTCTTCGCTCCCACCAAAAGAAAAAAAGTCCCCAACGTCAATATAACAAAACACCAA
CCACTTATATAACACTACAAACACCCCAAAATAAAAAAATATAAAAAAGACATCCAACCC
ACCCCAAACGACGCGGGGGAAACATTTTTTTTTTTTATTCCCCCCCCCCCCCCCCGCACC
AACCCACACACGCCAAGGAAAAAAAACCAAACCCCCGNCACAAAAAAAAAAAAAAAAAAA
AAACCTAGCGGGGGGGGGGTAGACACCCATTTTCCATACACGCCCACAAACACAATACAC
AACCAACAAAAATTCAACAACACCCCACACACTTAACAAAAACGCACGCCACAACCGCCA
CTAAACAATATAAGCACCCCCACCCCTATACAACGCAAAACAAATTAACAAAATATATAT
CTATCCATCCACACCCCCCAAACCAATAATACTCCTACCTCCCCCACATAATATGATTAA
AACACACATGGAACCTCGGCACCCCCAACAAAAACATACAAGCACACACACCGCCTACAG
ATGAATCTGCCCCGCCCCACCTACACCCTCACTCGCGCCCACCGCCGCATACACCCGCTT
ACTCACCCCCAATAACTAATCACCACTCACCTCGGTATAAACTATAAATAACAC
GenBank Accession BX003975 [GenBank]
Graphic View Graphic view of gene At1g55290
Predicted Position of Insertion Chr1:20626218 - go to primer design
BLAST e Value 2e-09
Hit Clone Code (BAC ID) F7A10
Hit Gene Code At1g55290 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37