SimpleSearch - Line and FST details


Line specific information

 
Line ID 379H03
Vector Used pAC161
Line Availability available as T3 set from NASC (N436375)
Segregation Analysis 50:48:40
Confirmed for Hit At3g29763
Parent of DUPLO pair none
Parent of pair(s) 67962, 96367, 96368, 96864, 96865

Gene hit At3g43600

 
Sequence (A. th genome BLAST matches underlined) 
>24-K017221-022-379-H03-8409
ATAGTGAGAAANCANCTCCTTCCTTGTGACTGGACCATCTGATCTTTCCATTAAAGGTTA
CAAACTTTCGACTAAAGTTTCGCAGCAGAGACGAACAGCTGCGCAGCTTCCCTCGGATGT
TGTGCTACCTCCTGTGAAATTTCCTTGGACCATGCTCAATGAATCTGATTGTATAACTCT
TATCTTCTCCAAGAGTTCTTCCGTTCCATCGCATTGTAGCATACCAAGAGCATAACTAGT
CATCTGCTTCACCTTTGTCCATAACCCTTGTCCTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX004393 [GenBank]
Graphic View Graphic view of gene At3g43600
Predicted Position of Insertion Chr3:15513707 - go to primer design
BLAST e Value 3e-131
Hit Clone Code (BAC ID) F22J12
Hit Gene Code At3g43600 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation aldehyde oxidase 2
Insertion Classification CDSi
Confirmation Status unknown
Other FSTs Supporting this Hit CR396847 [GenBank]

Gene hit At3g29763

 
Sequence (A. th genome BLAST matches underlined) 
>24-K017231-022-379-H03-8409
TACCCAATACTTATCAACGAAGCGAAAAACTACTGCCATTTGCTCTTTATCTGAAGCATC
AGCCGATTCATCTACAAGCAAGCCAAAGACATCATTATCCATTTCTTCAATAATAGATCT
ATGGGATCCTCCCTATAGTGAG
GenBank Accession BX004394 [GenBank]
Graphic View Graphic view of gene At3g29763
Predicted Position of Insertion Chr3:11594893 - go to primer design
BLAST e Value 1e-59
Hit Clone Code (BAC ID) MOD1
Hit Gene Code At3g29763 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation General transcription factor 2-related zinc finger protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37