SimpleSearch - Line and FST details


Line specific information

 
Line ID 380B06
Vector Used pAC161
Line Availability available as T3 set from NASC (N436402)
Segregation Analysis 50:48:45
Confirmed for Hit At3g59170
Parent of DUPLO pair none
Parent of pair(s) 89804, 89825, 89842, 89855

Gene hit At3g59170

 
Sequence (A. th genome BLAST matches underlined) 
>42-K017222-022-380-B06-8409
TGATCTGAGATCTCCGGACATGAAGCATTTACATTGAATATATCCTGACCTTACTTCTCG
AACATATCTATATATATCGCAGTACATGACAAAACCACTTATATACTCCCATAACACGAG
AATCGATCGCTCTCTCTAAGTTGCACTATGGGATCCACCCTATAGTGAGACATCAATGAA
AGGGCCATCTCTAATTTTGATAGTTAGCTTAACCAATGTCTCGCTCAAGAAGATCCTTGA
AGGAAGAGGATCAGATGTCCATTCATTCATGTCTACGACCAGATGGAGATCCGATACACC
ACGTACCAACACCTTGTGTATCCAAGGAACGACACTATCTGGATCAACAGGATCATGGCC
ATCAACCATCTTTAGAGAGAATTTGCCTATGGGATCCCCCTTATAGTGAG
GenBank Accession BX004428 [GenBank]
Graphic View Graphic view of gene At3g59170
Predicted Position of Insertion Chr3:21878813 - go to primer design
BLAST e Value 1e-118
Hit Clone Code (BAC ID) F25L23
Hit Gene Code At3g59170 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box/RNI-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX004428 [GenBank]


Last Updated on 10.06.2021 13:37