SimpleSearch - Line and FST details


Line specific information

 
Line ID 380B09
Vector Used pAC161
Line Availability available as T3 set from NASC (N436405)
Segregation Analysis 50:48:48
Confirmed for Hit At1g27000
Parent of DUPLO pair 2407
Parent of pair(s) none

Gene hit At3g41768

 
Sequence (A. th genome BLAST matches underlined) 
>66-K017222-022-380-B09-8409
GATCTGACATTTCCGGACATGAAGCCATTTACATCCGATTATGCCATTTACAATACGCTC
TCCACACTGGGTCCTGGAGGCTGTAAGACCCACTATTTTTCTATCTGCAGATACCACGAA
TGTTGAGAAATGACGGATTTTTAAGCCCATATCATCCTATGGGATCTCCACTATAGAGAG
ATACACTATGGGATCCTCCCTATAGTGAGACTCCCTATAGGGAGACAATCTACTTCCCTT
ATCGAGGATCCATTGGAAGGCAAGTCTGGAGCCTCCATACGCGAATATTCCTACTCCAAT
AACGAATATTTAAGCCGTTGGGGATCCTCCCTCTAATGAGAACCTTGGGATGGGTCGGCC
GGTCCGCCTTTGGTGTGCATTGGTCAGCTTGTCCCTTCGGTCGGCGATACGCTCCTGGTC
TTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTGTGAAGAAATTAGAGTGCTCAAAGC
AAGCCTACGCTCTGGATACATTAGCATGGGATAACATCATAGGATTTCCATCCTATTGTG
GTGGCCCTTCGGGATCGGAGTAATGGATTACAGGGACCAGTCGGGGGGATTCGTATTTCA
TAGTCCACAAGGGAATTCTTTGAATTTATGAAAGAACAACAACTTGGGAAAGCATTTTGC
CCAGGATGGTTTTCCTTAATCAAGAACGAAA
GenBank Accession BX004433 [GenBank]
Graphic View Graphic view of gene At3g41768
Predicted Position of Insertion Chr3:14198033 - go to primer design
BLAST e Value 2e-123
Hit Clone Code (BAC ID) F21A14
Hit Gene Code At3g41768 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation rRNA
Insertion Classification TS2TE
Confirmation Status unknown
Other FSTs Supporting this Hit BX004434 [GenBank]


Last Updated on 10.06.2021 13:37