SimpleSearch - Line and FST details
Line specific information
| Line ID | 380C12 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N436420) |
| Segregation Analysis | 50:50:37 |
| Confirmed for Hit | At1g32780 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 85331, 85335, 85341, 85344, 85345, 85346, 85347, 85348 |
Gene hit At1g32780
| Sequence (A. th genome BLAST matches underlined) | >91-K017232-022-380-C12-8409 TGATCTGANATTTCCCGGACATGAAGCCTTTACTCCTGAATATATCCTGATACTCAGGAT TCTCCGATAGCTACACCTGATATAACTAAGCGTTTACTAGAATAATCGGATGATTTAAAA GGGCGTGAAAACGTTTATCCGGCCTCCCATTTGTATGTGCATGCCCACCACAGGGTGCCC CTCTGGAGTGCTTGGCATTACGAGCGATGATGACTTCTGATCAACCACGCAAGACGTGCG ACAGCCTGTACTACGTGCATGCAGCATTGCACTAATAGATCCCATGACATGCCCTGGGTC ATGCTAATGGATCCTCCCTAATAGAGAGANNNNNNNNGATACTCCCTGNAATCTACGATT TATATGTGGTGAAAGTGTAACCTTATATTACCGTGAGCTTCCATTAGAGAAAAGATCCGA TAAATCTCTGCTACTTCACGATTAAAGAGATCTTCGGTGCATTCTTCAAATCTCTAAACC TCTCAAGAGATGATTCTACACATTCACAAAGTCTACTACACTATATATAATTTACCCAAC AAACACTTATTTTACTGCATTAATCAGGATATTATCTTACCTATAAATGGGTATCATCGT CATCAATACCGCCATAATCTGTGCTGAACGATGATATATTCAAAATGATCTA |
| GenBank Accession | FR809206 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:11870411 - go to primer design |
| BLAST e Value | 1e-81 |
| Hit Clone Code (BAC ID) | F6N18 |
| Hit Gene Code | At1g32780 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | GroES-like zinc-binding dehydrogenase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At5g50970
| Sequence (A. th genome BLAST matches underlined) | >91-K017222-022-380-C12-8409 GATCTGTAGATGCCNCGACATGAGCCATTTACAATTGATATATCCTGGCCTCGTAATTTT CATTCTCATTCGATTTCCTCACTATGGGATCCTCCCTATAGTGAGAGGTCACCCTATAAG CAACGACAACGCCAGTATGACTTCCCTGTAGGCTCACACTGCCTGGGAGAGCTTCCCAAA TGAGGACTGTTCCCTCTATGCAGGCCTGGTAAACCAAAGGACTGCATCTGAGCTACAGTA CACAATTCAAAGGATATCTTTCCAAAGAATGACGCCCTAGACCGCGATAGGTTAGACAAT GAACCTAGAGTCATCATTTTTATCAAACACCGTCAGCTTCCTATGGGATCCTCCCTATAG TGAGANNGNATTAC |
| GenBank Accession | BX004456 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:20737786 - go to primer design |
| BLAST e Value | 2e-12 |
| Hit Clone Code (BAC ID) | K3K7 |
| Hit Gene Code | At5g50970 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | transducin family protein / WD-40 repeat family protein |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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