SimpleSearch - Line and FST details


Line specific information

 
Line ID 380E04
Vector Used pAC161
Line Availability available as T3 set from NASC (N436436)
Segregation Analysis 50:45:33
Confirmed for Hit At1g74180
Parent of DUPLO pair none
Parent of pair(s) 9698, 94288, 94295, 94296, 94297

Gene hit At1g74180

 
Sequence (A. th genome BLAST matches underlined) 
>29-K017232-022-380-E04-8409
ATTCTACTGAAGATTTGCGTTCATTGATCTCCGTGGAATTATTTCGTATGTCAGCTTCCT
GTGTGTTTAGGTAACTTGAACAAGCTGCGGGTTCTTGATCTCTCATCAAACCAGTTAAGT
GGAAATCTACCAGCTATGGGATCTCCTCTATAGTGAGANNNNNNNNNGNNNNNNNTGNAC
TTNNNNNNAANNGNNNGNCANGCCNNACGNCCNTCNCNATCCNNTCCTGGNATCCTCCCT
TTAGAGAGGAGGTTGGAACGTCTTCTTTTTCCACGATGCTCTTCGGGGGTGGGGGTCCAT
CTTTGGGACCACTGTCCGAAGAGGCATCTTCAACGATGGCCTTTCCTTTATCATAATGAT
GGCATTGGGAGGAGCCACCTTCGTTTTCCACTATCTTCACAATAAAGTGACCGATAGCTG
GGCAATGGAATCCGAGGAGGTTCCCGGATATTACCCTTTGTTGAAAAGTCTCACTTGCCC
TTTGGGCTTCTGAGACTGTATCTTTGATATTTTTGGAGAAGACAAGCGTGGCCCGCTCCA
CCCTGTTGACGAAGAATTTCTTCCTGTCATTGAGCCCCAAGAAACTCTGTATGACCTGGC
CGCCAGTCTTTTACGGCGAGCTCCTGTTAGGGCCTCTAATTGGACTCTTGGAACCCAGGG
GAAATTGGGATCCTC
GenBank Accession BX004479 [GenBank]
Graphic View Graphic view of gene At1g74180
Predicted Position of Insertion Chr1:27899334 - go to primer design
BLAST e Value 3e-48
Hit Clone Code (BAC ID) F9E11
Hit Gene Code At1g74180 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation receptor like protein 14
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37