SimpleSearch - Line and FST details


Line specific information

 
Line ID 380H01
Vector Used pAC161
Line Availability available as T3 set from NASC (N436469)
Segregation Analysis 50:46:33
Confirmed for Hit At2g38380
Parent of DUPLO pair none
Parent of pair(s) 76002, 76112, 76340, 76423, 76627, 76682, 76683, 76689, 76692, 76693

Gene hit At2g38380

 
Sequence (A. th genome BLAST matches underlined) 
>08-K017222-022-380-H01-8409
TGATCTGACGATTTCCCGGACATGAAGCCATTTACATTGATATATCCTGTCATCCTCACT
ATTTACATGAGTCGTATGTAGATCACTCTAACGACATAATCTAATAATATGCTGCAAACC
TTGGAAGGTCATGTACTCTACAAACTACTATATAAAGGCTACACTCTTTCCTATGGCATC
CTCCCTATACTGTAGACCTCTCCGTTTTTCAATCTTACTCAACTTAAAACAGCCTTTGCT
GACGTTGGCCTAAACCGCACTTCCGACCTATGGGATCCTCCCTATAATGAGATTCATGTT
ACATCATCTAACTCTAATTAAGATATGCATGTGTTTAAAATGCAATTCCTTTTTATATAT
TGATAGCTAGCTAAGCTAGACACACACATTCCTATGGGATCCTCCCTATAGTGAGACACT
ATGGGATCCTCCCTATAGTGAG
GenBank Accession BX004523 [GenBank]
Graphic View Graphic view of gene At2g38380
Predicted Position of Insertion Chr2:16077029 - go to primer design
BLAST e Value 6e-77
Hit Clone Code (BAC ID) T19C21
Hit Gene Code At2g38380 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Peroxidase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX004523 [GenBank]


Last Updated on 10.06.2021 13:37