SimpleSearch - Line and FST details


Line specific information

 
Line ID 381B01
Vector Used pAC161
Line Availability available as T3 set from NASC (N436493)
Segregation Analysis 50:47:40
Confirmed for Hit At3g05550
Parent of DUPLO pair none
Parent of pair(s) 3669, 3692, 3724

Gene hit At3g05550

 
Sequence (A. th genome BLAST matches underlined) 
>02-K017268-022-381-B01-8409
TATCATGAGATTTCTCGGACTGAAGCCATTTACATTGCTGTAGATCTGATCCCATTTAGA
CATGACAACGATCGACATACAACATTCTTGATCGGGAGTATATCAAACTCCAGGATGGAT
CGATGGGATCTCGCCCGATAGAGAGATTTGTAAAGTTTTTGAGTCTCATTTGCATTTTGA
AACATTTTCTGTAGCCATGAACATTTATAGTTGAACAACATCATCATCTCCATGTCCCAA
AAGCATGTACATTTCTCTGTTCTTGCCTGTAAGCTATAGTTGTTATCGACATAAATTTTA
TGTTCTTAGCCAAATCATTTGTTCGAGACATCCAGTCACATGGTACTGTACGAAGCACTT
TTCTCACCGAGCTTCTTCTCAGGTTGCACGCTCAGGCGCTGACTTTAGCTGCTTTGGCTG
GAGCAGCCGTGGTGGAGTACTATGACCACAAAACTGAAGCTACCAACCGCTATCCGAAGT
TTCTGCCACCGGAAAATTTATCTCACAAAGACTAGAAACTCTAAACTCCTAAGCTGCAAT
GGTTGGTTGCAGCGTTTTCTGTTTGGTACAAGGTCTCGTAGCTATGGGATC
GenBank Accession BX004555 [GenBank]
Graphic View Graphic view of gene At3g05550
Predicted Position of Insertion Chr3:1613292 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F22F7
Hit Gene Code At3g05550 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Hypoxia-responsive family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX004554 [GenBank]


Last Updated on 10.06.2021 13:37