SimpleSearch - Line and FST details
Line specific information
| Line ID | 382C01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N436601) |
| Segregation Analysis | 50:48:44 |
| Confirmed for Hit | At2g25350 |
| Parent of DUPLO pair | 11931 |
| Parent of pair(s) | none |
| Note |
Gene hit At2g46455
| Sequence (A. th genome BLAST matches underlined) | >03-K017269-022-382-C01-8409 GAAAAATGGCGGAAATCAGAGTACGAAGAGTTACGAAATTGTGAAAAATCATTACTTTTG CGTGCTTTTTCTGCTTCAAATGGGGGAACCACTGTGTATCTCTTTATCCTGTGGAAACTT AGGGTTTCTGTTTCATTTTGAAATTTGGGGAAAATCTCTGGTTAAGATGTGTCTCTTTGG CTATGGGATCCTCCCCTATAGTGAGANAACAACAAANACTATTTACCAATTTTTTTTCCA TTCAAAAACGAAAATGCCCCGCATCCTTTATTATAAAAAAAATCGCCCTACGATCCTCCT TCGCCTACTTAACCCAACCAACCAGGGGGGAAACAAATCACATATGAAATACACCTCAAC CTAACCCGCCAAGGCGGAAAAAACGGACGAAACACCACAGAATATGCAGAGGCACACGAC GACCTTTAACTAACTACCGTCTTGCGCTCACACACTCTATACGCACATCGCCGTAAGTGG AATTGATATCCTCTGCGCCCCGGGATCCGCACCTTAAAATACTACCCTCCCCATATCCAT TCTCACATCAATAACAAGAACATATTTATGACGCCCGCCGTTATACTTACCCCCCACTTA CTTTATTCACCGCCCGGGACCCCAAACCTCATATCATAAACCCCCCCACGAACAACACGC TCCACATAACCCCCAACAAGAATCCCAGTACCCGTCCACCTTAGTACACCCAAACTCATC CATGCCCGACACAATTCGCGTATCAATATGGCCTGAAAATTATCCGCAGACCTGATATTA ACACACCTTTTCACACTCACAACATCTACACATTACTCTCCCCACTTATAACACATAACT TTTTTAACGCCCGCCGACGCGGAAAAACGCACTCACGTGTGTATACAATTTCCCATTCTT CCAAC |
| GenBank Accession | BX285354 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr2:19071106 - go to primer design |
| BLAST e Value | 3e-94 |
| Hit Clone Code (BAC ID) | F11C10 |
| Hit Gene Code | At2g46455 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | OxaA/YidC-like membrane insertion protein |
| Insertion Classification | Promoter |
| Confirmation Status | failed, line belongs to a contamination group, please check line 366C01 |
Gene hit At2g25350
| Sequence (A. th genome BLAST matches underlined) | >03-K017265-022-382-C01-8409 TGTCTGAGATTTCCGGACTGAAGCCATTTATCTTTGAATATATCCATGTAGCTCTTCATT GTTGACCATCATACCTCTTCTAACATATCTCTACTTTTGACACGCAAAAATCCTTTAGGA GGAGCTGATGGAAAACTTTTCCTATGGGATCTCGCCTATAGTGAGAGTTTCTGTTTCATT TTGAAATTTGGGGAAAATCTCTGGTTAAGATGTGTCTCTTTGCCTATGGGATCCTCCCTA TAGTGAG |
| GenBank Accession | BX285353 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr2:10798426 - go to primer design |
| BLAST e Value | 1e-34 |
| Hit Clone Code (BAC ID) | T22F11 |
| Hit Gene Code | At2g25350 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Phox (PX) domain-containing protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
