SimpleSearch - Line and FST details


Line specific information

 
Line ID 383E09
Vector Used pAC161
Line Availability available as T3 set from NASC (N436729)
Segregation Analysis 50:49:46
Confirmed for Hit At3g09110
Parent of DUPLO pair none
Parent of pair(s) 12222

Gene hit At3g09110

 
Sequence (A. th genome BLAST matches underlined) 
>69-K017266-022-383-E09-8409
CATGCCTATGGTGATCGTTTTTATACCGGAGGAGCTTGCATGTTGGTGTCAACATTTTAC
GTTTCCTTGACATGCAATGTTTCCTCAGGAAGGTGTCTGTCAATGGAGCTTCCGAAGTGA
ACAAACACCCTATGGGATCCTCCCTATAGTGAGANNNNNNNNNNNNNNNNNNNNNCNNCN
NNNNNNNNNNNANNNTNNNNNNNNNCNNNNNAANNNNTNACCNNNNNNNNNNANNNNNTT
NNNANAANNNNNNNNNNNNNNNNAAANANNNANNNANNNAAANNAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAANNAAATTTANANAAANNANAAAAAAAAAAAAAANAAAAA
AAAAAAAAAAACAANANAAAAANNAANNNAAAAAAAAANAAAAAAAAAANCCACCCCAAC
CACCNACCCCACCAAAAACAAAANCCCACCCACCAACAAAACCCACACAAAACCCACCCA
AACTAAACACCAACCAAAAAAAACCCACCACAAAACCAAAAAAAACCAACCCCACCCCCA
CCAAACAAAAAAACCCCAACAAAACCAACCAAAAAAAAAAAAAACCAACCCCACACAAAT
AATATATCCACAAAACACAATATAATAATTTAATATATACATAATCCACACCTACCTTTT
NAACACTCACAATCATATCACCATACAACAACCACACACAAACCATCAAACAATTACTTA
TCATCACAAACTATTCCACATAAAAACCACCAACCACCAATCCATCTACTCTAACAATAA
CCCAACAACTCTCACAAAATTTTATT
GenBank Accession BX285534 [GenBank]
Graphic View Graphic view of gene At3g09110
Predicted Position of Insertion Chr3:2795124 - go to primer design
BLAST e Value 6e-43
Hit Clone Code (BAC ID) MZB10
Hit Gene Code At3g09110 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein (DUF674)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37