SimpleSearch - Line and FST details


Line specific information

 
Line ID 383G09
Vector Used pAC161
Line Availability available as T3 set from NASC (N436753)
Segregation Analysis 50:48:34
Confirmed for Hit At2g05171
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At2g05171

 
Sequence (A. th genome BLAST matches underlined) 
>71-K017270-022-383-G09-8409
TTGATATACTCAAAAGAGATTCAGACGTTCTTCTTCTTCTTCTTCAGACATGGTGAAAGC
TATGGGATCATCCCTATAGTGAGACTACATCTTGATTATTCGTATTGCTATGGGACCCTC
CCGATAGTGAGGCTTTGTTACCTCCATGACGCTTCTATCTCAATGGAAAGATCAGTCTTG
TTCCTTTCTCATAATCGCTGTAGACACGTCTTGTCTAGACACTTTACTTTCTTCACTCTT
ATTTGACTCTAATGACACATTACCTACTCTGAGAGTCACCTTACCAGGATTTGAACTCTG
AATACTTAACTTCATGATATTATCAATCTAATCAAGACTCACGAGTGTCATCTTATGACC
TCAGTTAATAATATTAATAAAACAAGATTCTATGGGATCCTCCAAAATAGTGAGCATTCC
GAACATTCAAGTCTCAACCATTTGTATTTTTCAATTAATGGTTTATATTCGAGGGGTAGG
TGTATATATAGCCAAAGCCGAAAGATAATAAATAGATTTCCTTATTTATCAAGTCCCACC
TCATCATTCATTCAACTTTCTTGGATATATGTACTGAGAGCGAGACACCACCACATGACT
CTATGGGATCTCCCCCTAAGTGAGAAANNNNCCCCCNNAANAANGCAAAACCGCGCGAAA
AAAAAACCCCACGAGCCGGCCCAACGATAAAGCCCCAGCAGACACCACAAATCCCGNGCG
CGCCACCCCCCCAGCCCAAAGACAAACACAAACACAA
GenBank Accession BX285572 [GenBank]
Graphic View Graphic view of gene At2g05171
Predicted Position of Insertion Chr2:1874880 - go to primer design
BLAST e Value 8e-110
Hit Clone Code (BAC ID) F5G3
Hit Gene Code At2g05171 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX285572 [GenBank]


Last Updated on 10.06.2021 13:37