SimpleSearch - Line and FST details
Line specific information
| Line ID | 384C12 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N436804) |
| Segregation Analysis | 50:48:44 |
| Confirmed for Hit | At3g14150 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 96133, 96136, 96138, 96139 |
Gene hit At3g14150
| Sequence (A. th genome BLAST matches underlined) | >91-K017271-022-384-C12-8409 TATCTGAAATTTCCCGGACATGAAGCCATTTAATCTAGATATATCCTGACTAACAGAGAA TTCAGACTACACTCTATGCTCTGATCCAAAAAACCAACAGATATGGTCTGATAAACTTAA TCAGACAGCTGAAGAACCGTGGCCCCCAGCAGCCATGCTACAAGAACAAGGACTGAAGCA TGGATTCAATTCAACACTCATCTTTTGAAAAGACATATGATAAACATATTGAATGCTTGC CTGACACAGTGATGTGGCTAGGGCATAGAAATATAAATATAAAGGAAAGACCTGCAGCAT CAATCATGAGTTTGATCCTATCTCTATGGGATCCTCCTAATAGTGAGACGCNACGAATCA TTGACTCTCATGGG |
| GenBank Accession | BX285641 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:4690692 - go to primer design |
| BLAST e Value | 1e-111 |
| Hit Clone Code (BAC ID) | MAG2 |
| Hit Gene Code | At3g14150 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Aldolase-type TIM barrel family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit MJB21
| Sequence (A. th genome BLAST matches underlined) | >91-K017267-022-384-C12-8409 TGATCTGAAATTTCCCGGACTGAAGCCATTTACATTGAATATACCCGGTGATGTATAATG TACTCGAATCTATGTATATGCCTCATGGATAGCATAGAATACAAGCGTTGAAATGTATGA AACAAACTTTTCTTCAGTCGTTTCTTGATTATATATGCTCTAAACATACTTCTCTTTACT ACGTTATGAGATGTTTATGCTAAAATAGAAATCAAAGCTGATTTTTAAGAATGCTCAACA AGTAGTATTTTAGGATCGGACAATGATATCATCATATTAGCATGCACAATTCATTTGAAA ATTCCCATTTTCTCTAAGCGTGAATTATTGTATTCATCTTATTATAAGCAATGCAACGCG CTAAAGCACTATGGGATCCTCCTTATAGTGAGATAAGCTCGATACTAAGATTTTTTCATT AATAATTTCGTTGATAAGTCTAAAGTGGATCAAGCGATACTTTAGGTTATATCCGTTTAA ATTATTTAGGAGAAAGTGATGCGATTTTAGTAGGAGATTTAATCATTAGAACAACTTAGC TCTTAAGAGTTTAAACAACAAATAAAAACATCAAACATCAAACTAAATTTACTGTTATTT CCCATTCCCTAAATTTCAAGGATTTTTTGCACCCCTTCCAAATATTGTTAACAAAATATC AGATTTAGCAGTGGAAGACTGAAGAGGACAATTAGCCTA |
| GenBank Accession | BX285640 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:17124895 - go to primer design |
| BLAST e Value | 1e-155 |
| Hit Clone Code (BAC ID) | MJB21 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
