SimpleSearch - Line and FST details


Line specific information

 
Line ID 385C05
Vector Used pAC161
Line Availability available as T3 set from NASC (N436893)
Segregation Analysis 50:46:21
Confirmed for Hit At4g05410
Parent of DUPLO pair none
Parent of pair(s) 12259

Gene hit At4g05410

 
Sequence (A. th genome BLAST matches underlined) 
>35-K018248-022-385-C05-8409
ATCTGTTATTTCCCGGACTGAAGCATTCTACATTGAAAATCTAAGCCATTGATGCACTGA
GGAAGGAGCGTGCACTTACGGTTGGAAGAGATAGAACCATGCTGTATCATAAGGTAATAG
TTCTATCCTCCATGTAAACACTGTTGGAAGATATCATCATAAGGTTTCTATTATTATTCT
GTATTTGTAAGTCTTGTTATATGATTATAGGTGCCTGAGAGCACCCGTATGATCTATCGA
GCTCCTGCATCGTCTCTTGAGAGCTGCTGTTTCATCAGTGATAATGAGTACCTGTCTGGT
TCGGATAATGGAACTGTTGCTCTTTGGGGCATGTTAAAAAAGAAACCGGTGTTCGTTTTC
AAGAATGCACATCAAGATATACCTGATGGGATTACCACCAATGGAATCTTAGGTGAAACC
TAATTTAGATCCTCCCCATTTCATCTCTGTTGCAGTTGGATCTTGACATTGCAGTATATA
GTTATAAAACACTTTTGTTTCGTTGCAGCTACTGATGCTCTGAAATATCTNATTCTTATT
TATTTGCTTAACAGAANACGGTGATCATGAACCAGTCAACAATAACTGTTCAGCANATTC
TTGGGTCAATGCAGTTGCTACTATTAGATGCGCCGTTCTATGCTGCACCTGGAGCTGGAT
ATGGTATTGTGCGTTTGTGGGCTGTTGAAACTAATGCAATTCACCCTTTGTACGAGCTTC
ACTGGGTAATTTTCGTTC
GenBank Accession BX285756 [GenBank]
Graphic View Graphic view of gene At4g05410
Predicted Position of Insertion Chr4:2744291 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) C6L9
Hit Gene Code At4g05410 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Transducin/WD40 repeat-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37