SimpleSearch - Line and FST details


Line specific information

 
Line ID 386F12
Vector Used pAC161
Line Availability available as T3 set from NASC (N437032)
Segregation Analysis 50:48:36
Confirmed for Hit At1g29350
Parent of DUPLO pair none
Parent of pair(s) 11815

Gene hit At1g29350

 
Sequence (A. th genome BLAST matches underlined) 
>94-K018249w-022-386-F12-8409
TGATCTGTAGATTCCNGGACATGAAGCCATTTACATTGAATATATCCTGAACAAGACAAC
AAAGCAAAATGTCATATGTGGGTCTCTGAGATAATATCATGAACACGAAGTTAATGCACA
ATCAGCAGGCCCCTGTTAAAGATGAATGGCCGTCGATTGAGAAGCCGCTGGCTCCTATGG
GATCCTCCCTATGGTGAGATGATATCGGCACCTTCGACCGCCTGTTCCGCAGAGGTGCAG
GCCTCGATCTGAAACCCGAACCGCTGGAGATTGCGGGAGCAGCGAGCAGTAGCCTCGGGG
TCGATGTCGTAAAGTCGTATCCGATCGACGCCGATCATCGCCTTGAAGGCCAAAGCCTGG
AACTCACTTTGGGCACCGTTGCCGATCAGCGCCGTCGTGCGCGAATCTTTACGGGCCAGA
TACTTTGCCGCCGATCGCGGAGGTCGCGGCCGTTCGCAAGGCCGTCAGGATTGTCATTTC
CGACCGCAGCAACGGATAGCCGCTATCGACCTCGGAGAGCACGCCAAACGCGGTTACCTA
TGGGATCCTCCCCTATGGTGAGGACCCAACCGAAGAGCGATTCCCAACTTTTTCGCGGTA
CACAAAAAAGAAATATCCACCCGCCACTTAAGAACAAGGAGGCGCGTCGTGGGTGAGTTC
CGCCCCCGGGGGACGCGCGTGCACCGGGGGGGAATAAACGCGGACCCCCTATCCCGATAC
CGCGGTGCATTTTTCTTTCACTTTGCTACCTCCAAGCGGGAGAAAGGAGCACCAATAAAC
AGGTTGTGCGACAATAAACGCGTGGGGGCACACAACAAATGAAAGCCGCGGCGGGCGAGT
AAGAAGGATATCAGCGGTG
GenBank Accession BX285925 [GenBank]
Graphic View Graphic view of gene At1g29350
Predicted Position of Insertion Chr1:10271618 - go to primer design
BLAST e Value 1e-47
Hit Clone Code (BAC ID) F15D2
Hit Gene Code At1g29350 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RNA polymerase II degradation factor-like protein (DUF1296)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX285926 [GenBank]


Last Updated on 10.06.2021 13:37