SimpleSearch - Line and FST details


Line specific information

 
Line ID 386H06
Vector Used pAC161
Line Availability available as T3 set from NASC (N437050)
Segregation Analysis 50:50:39
Confirmed for Hit At4g09340
Parent of DUPLO pair 2274
Parent of pair(s) none

Gene hit At4g09340

 
Sequence (A. th genome BLAST matches underlined) 
>48-K018253-022-386-H06-8409
TGATCTGAAATTTCCCGGACTGAAGCCTTTACATTGAATATATCCTGTTACAGTTCTGAC
ATATCTCTGTTATGAGATGCCAATGTAAATGGAACTCTGGAAGGGACAGTCTCCAAGTAC
ATCAAGGGTCCTCTATTCCCTACAGTACCTGTACATAGCCAAAACAAATAGTATGCTCTC
TTTGTTTCTTAATATGATGTCAACGTGAACTATTTTTCAAGTGCTTGAATATGTTCTTTG
TATGATGTTCTGAATCTTGGTAGGGTCTACAGTCAACTTCGGGCAGGAGAAGTTTGCCTT
TGATTTTAAGGTAAGATCCTTGAATATTTTTGGTATGCTATGGGATCCCCACTTGTAGAG
AGACGTANGTAACACCTTCAGACTCCCACTATCTTGCAAATTTGGATGAAGATATTCCGG
GCCATGGATTCCTGAATATGGATGACTGATATAAACCTCATTGAGAATAACCGCGAGGAG
TCCTGGGATCATTCTGAGACAGTCCTCCCGGATAGTAAGTGAAGTAAAACAATCGTGGCG
GGGCTCCACCATGTTGGGCGAAGATGGGTCTTCTTGTCATGTGGATCCTAAAGAGACGTC
TGTATGAACTGGTGCGCCAG
GenBank Accession BX285954 [GenBank]
Graphic View Graphic view of gene At4g09340
Predicted Position of Insertion Chr4:5926860 - go to primer design
BLAST e Value 3e-137
Hit Clone Code (BAC ID) T30A10
Hit Gene Code At4g09340 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation SPla/RYanodine receptor (SPRY) domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX285953 [GenBank]


Last Updated on 10.06.2021 13:37